RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 GAKO14976 1311 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 ATRNL1Q5VV63 1379 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 EYSQ5T1H1 3165 aa6.41□□□□□ -1.38
CKAP4-203ENST00000553039 ZBBXA8MT70 800 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 ARVCFO00192 962 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 GRM8O00222 908 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 AP1G2O75843 785 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 ACTN1P12814 892 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 AKR1A1P14550 325 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 PRDX5P30044 214 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 FOSBP53539 338 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 KCNA10Q16322 511 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 FAM47AQ5JRC9 791 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 PTCRAQ6ISU1 281 aaPredicted RBP6.4□□□□□ -1.38
CKAP4-203ENST00000553039 LBX2Q6XYB7 198 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 DZIP1Q86YF9 867 aaKnown RBP6.4□□□□□ -1.38
CKAP4-203ENST00000553039 SUGP1Q8IWZ8 645 aaKnown RBP6.4□□□□□ -1.38
CKAP4-203ENST00000553039 SHCBP1Q8NEM2 672 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 ARNTL2Q8WYA1 636 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 ATOH1Q92858 354 aaPredicted RBP6.4□□□□□ -1.38
CKAP4-203ENST00000553039 FAM184BQ9ULE4 1060 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 CNPY2Q9Y2B0 182 aa6.4□□□□□ -1.38
CKAP4-203ENST00000553039 SALL1Q9NSC2 1324 aa6.4□□□□□ -1.39
CKAP4-203ENST00000553039 ZFHX2Q9C0A1 2572 aaPredicted RBP6.4□□□□□ -1.39
CKAP4-203ENST00000553039 ARAP2Q8WZ64 1704 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 AK9Q5TCS8 1911 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 GPR75-ASB3A0A0A6YYF3 556 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 A0A0U1RQG5 324 aaPredicted RBP6.39□□□□□ -1.39
CKAP4-203ENST00000553039 COBLO75128 1261 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 CNMDO75829 334 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 ATG7O95352 703 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 PFKMP08237 780 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 FCER1AP12319 257 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 MYOGP15173 224 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 CYP2C18P33260 490 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 BTDP43251 543 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 GSTO1P78417 241 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 COG2Q14746 738 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 ATF7IPQ6VMQ6 1270 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 G2E3Q7L622 706 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 CCDC146Q8IYE0 955 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.39□□□□□ -1.39
CKAP4-203ENST00000553039 ALG2Q9H553 416 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 UBE2ZQ9H832 354 aaPredicted RBP6.39□□□□□ -1.39
CKAP4-203ENST00000553039 CERS4Q9HA82 394 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 CTNNA3Q9UI47 895 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 GNEQ9Y223 722 aaKnown RBP6.39□□□□□ -1.39
CKAP4-203ENST00000553039 DIS3Q9Y2L1 958 aaKnown RBP6.39□□□□□ -1.39
CKAP4-203ENST00000553039 ZNF536O15090 1300 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 PRRC2BQ5JSZ5 2229 aaKnown RBP6.39□□□□□ -1.39
CKAP4-203ENST00000553039 CACNA1BQ00975 2339 aa6.39□□□□□ -1.39
CKAP4-203ENST00000553039 A0A1B0GUL7 405 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 ALDH1L1O75891 902 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 CA3P07451 260 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 SLURP2P0DP57 97 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 ERCC3P19447 782 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 FGFR2P21802 821 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 KCNA5P22460 613 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 GRB10Q13322 594 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 WDR43Q15061 677 aaKnown RBP eCLIP6.38□□□□□ -1.39
CKAP4-203ENST00000553039 LRRC24Q50LG9 513 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 BEND3Q5T5X7 828 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 CRACR2BQ8N4Y2 399 aaPredicted RBP6.38□□□□□ -1.39
CKAP4-203ENST00000553039 MB21D1Q8N884 522 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 KLHDC9Q8NEP7 349 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 MAML3Q96JK9 1138 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 C12orf42Q96LP6 360 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 FEZ1Q99689 392 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 NOL10Q9BSC4 688 aaKnown RBP6.38□□□□□ -1.39
CKAP4-203ENST00000553039 TINF2Q9BSI4 451 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 HIPK3Q9H422 1215 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 DDX4Q9NQI0 724 aaKnown RBP6.38□□□□□ -1.39
CKAP4-203ENST00000553039 ABCF2Q9UG63 623 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 CHD8Q9HCK8 2581 aa6.38□□□□□ -1.39
CKAP4-203ENST00000553039 PALM3A6NDB9 673 aaPredicted RBP6.37□□□□□ -1.39
CKAP4-203ENST00000553039 RCCD1A6NED2 376 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 FAM196BA6NMK8 535 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 PROB1E7EW31 1015 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 NCK2O43639 380 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 DUSP11O75319 330 aaKnown RBP6.37□□□□□ -1.39
CKAP4-203ENST00000553039 CABYRO75952 493 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 BAG3O95817 575 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 SLC25A27O95847 323 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 SOX11P35716 441 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 TAP1Q03518 808 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 GNASQ5JWF2 1037 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 KRT40Q6A162 431 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 NCAPG2Q86XI2 1143 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 MSL3Q8N5Y2 521 aaKnown RBP6.37□□□□□ -1.39
CKAP4-203ENST00000553039 TSPYL6Q8N831 410 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 VGLL2Q8N8G2 317 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 PRSS33Q8NF86 280 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 EDAQ92838 391 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 ZDHHC16Q969W1 377 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 CDCA7LQ96GN5 454 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 SLC9A7Q96T83 725 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 POP1Q99575 1024 aaKnown RBP6.37□□□□□ -1.39
CKAP4-203ENST00000553039 MOV10L1Q9BXT6 1211 aaKnown RBP6.37□□□□□ -1.39
CKAP4-203ENST00000553039 SPATC1LQ9H0A9 340 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 SIL1Q9H173 461 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms