RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 CPXCR1Q8N123 301 aa11.84□□□□□ -0.51
LINC00661-207ENST00000552685 LRRC47Q8N1G4 583 aaKnown RBP11.84□□□□□ -0.51
LINC00661-207ENST00000552685 FAM161BQ96MY7 647 aa11.84□□□□□ -0.51
LINC00661-207ENST00000552685 XPNPEP3Q9NQH7 507 aa11.84□□□□□ -0.51
LINC00661-207ENST00000552685 NYAP2Q9P242 653 aa11.84□□□□□ -0.51
LINC00661-207ENST00000552685 PRKAG2Q9UGJ0 569 aa11.84□□□□□ -0.51
LINC00661-207ENST00000552685 TRIM43BA6NCK2 446 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 ZNF865P0CJ78 1059 aaPredicted RBP11.83□□□□□ -0.52
LINC00661-207ENST00000552685 RARBP10826 455 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 TLE2Q04725 743 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 SHHQ15465 462 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 C9orf50Q5SZB4 431 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 CCDC129Q6ZRS4 1044 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 IFNL3Q8IZI9 196 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 BADQ92934 168 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 KIFC2Q96AC6 838 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 TRIM43Q96BQ3 446 aaPredicted RBP11.83□□□□□ -0.52
LINC00661-207ENST00000552685 CEP95Q96GE4 821 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 TEX13BQ9BXU2 312 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 RAVER2Q9HCJ3 691 aaKnown RBP11.83□□□□□ -0.52
LINC00661-207ENST00000552685 PDLIM7Q9NR12 457 aa11.83□□□□□ -0.52
LINC00661-207ENST00000552685 MCM3APO60318 1980 aa11.82□□□□□ -0.52
LINC00661-207ENST00000552685 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
LINC00661-207ENST00000552685 ZFYP08048 801 aaPredicted RBP11.82□□□□□ -0.52
LINC00661-207ENST00000552685 ITGB8P26012 769 aa11.82□□□□□ -0.52
LINC00661-207ENST00000552685 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
LINC00661-207ENST00000552685 SNX17Q15036 470 aa11.82□□□□□ -0.52
LINC00661-207ENST00000552685 ZNF444Q8N0Y2 327 aaPredicted RBP11.82□□□□□ -0.52
LINC00661-207ENST00000552685 PI4K2BQ8TCG2 481 aa11.82□□□□□ -0.52
LINC00661-207ENST00000552685 FSD1Q9BTV5 496 aa11.82□□□□□ -0.52
LINC00661-207ENST00000552685 INCENPQ9NQS7 918 aa11.82□□□□□ -0.52
LINC00661-207ENST00000552685 ISY1Q9ULR0 285 aaKnown RBP11.82□□□□□ -0.52
LINC00661-207ENST00000552685 PHF24Q9UPV7 400 aa11.82□□□□□ -0.52
LINC00661-207ENST00000552685 TTC28Q96AY4 2481 aa11.82□□□□□ -0.52
LINC00661-207ENST00000552685 MYADML2A6NDP7 307 aa11.81□□□□□ -0.52
LINC00661-207ENST00000552685 PQBP1O60828 265 aaKnown RBP11.81□□□□□ -0.52
LINC00661-207ENST00000552685 ZBED4O75132 1171 aa11.81□□□□□ -0.52
LINC00661-207ENST00000552685 SNAI1O95863 264 aaPredicted RBP11.81□□□□□ -0.52
LINC00661-207ENST00000552685 GNAT2P19087 354 aa11.81□□□□□ -0.52
LINC00661-207ENST00000552685 COPB2P35606 906 aa11.81□□□□□ -0.52
LINC00661-207ENST00000552685 SLFN13Q68D06 897 aa11.81□□□□□ -0.52
LINC00661-207ENST00000552685 FAM109BQ6ICB4 259 aaPredicted RBP11.81□□□□□ -0.52
LINC00661-207ENST00000552685 PRPF38AQ8NAV1 312 aaKnown RBP11.81□□□□□ -0.52
LINC00661-207ENST00000552685 DDX11Q96FC9 970 aa11.81□□□□□ -0.52
LINC00661-207ENST00000552685 MTMR4Q9NYA4 1195 aa11.81□□□□□ -0.52
LINC00661-207ENST00000552685 ZHX1Q9UKY1 873 aaPredicted RBP11.81□□□□□ -0.52
LINC00661-207ENST00000552685 CNPY2Q9Y2B0 182 aa11.81□□□□□ -0.52
LINC00661-207ENST00000552685 DIS3Q9Y2L1 958 aaKnown RBP11.81□□□□□ -0.52
LINC00661-207ENST00000552685 CTDP1Q9Y5B0 961 aaPredicted RBP11.81□□□□□ -0.52
LINC00661-207ENST00000552685 A0A1W2PQ45 241 aaPredicted RBP11.8□□□□□ -0.52
LINC00661-207ENST00000552685 A0A1W2PQY0 241 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 ADAMTS4O75173 837 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 AKR1A1P14550 325 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 EPHB4P54760 987 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 SNAP25P60880 206 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 TFAP4Q01664 338 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 ZMYM1Q5SVZ6 1142 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 RASGRP2Q7LDG7 609 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 RNF180Q86T96 592 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC00661-207ENST00000552685 NEDD1Q8NHV4 660 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 MKL1Q969V6 931 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 FGD4Q96M96 766 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 NAPBQ9H115 298 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 TTYH1Q9H313 450 aaPredicted RBP11.8□□□□□ -0.52
LINC00661-207ENST00000552685 SLC38A10Q9HBR0 1119 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 HOMER2Q9NSB8 354 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 NRBP1Q9UHY1 535 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 TACC3Q9Y6A5 838 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 DDX49Q9Y6V7 483 aaKnown RBP11.8□□□□□ -0.52
LINC00661-207ENST00000552685 TTC41PQ6P2S7 1318 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 SYNRGQ9UMZ2 1314 aa11.8□□□□□ -0.52
LINC00661-207ENST00000552685 CHD9Q3L8U1 2897 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 DNAJC25-GNG10A0A024R161 153 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 TMEM232C9JQI7 657 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 FOXP2O15409 715 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 ADCY6O43306 1168 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 TTLL1O95922 423 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 BMP3P12645 472 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 CTDSPL2Q05D32 466 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 PPARAQ07869 468 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 ANKRD35Q8N283 1001 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 NACAP1Q9BZK3 213 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 FEM1BQ9UK73 627 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 MTMR7Q9Y216 660 aa11.79□□□□□ -0.52
LINC00661-207ENST00000552685 ATP2A1O14983 1001 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 ERC2O15083 957 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 NMT2O60551 498 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 CLTBP09497 229 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 MX1P20591 662 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 PTGS1P23219 599 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 MCCP23508 829 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 ACLYP53396 1101 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 CNTN2Q02246 1040 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 PDE4BQ07343 736 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 KCNA10Q16322 511 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 VPS53Q5VIR6 699 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 C1orf53Q5VUE5 145 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms