RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 SPSB2Q99619 263 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 LNPKQ9C0E8 428 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 ASCC2Q9H1I8 757 aaPredicted RBP10.84□□□□□ -0.67
UBE2N-206ENST00000552442 ARPP21Q9UBL0 812 aaPredicted RBP10.84□□□□□ -0.67
UBE2N-206ENST00000552442 STAP2Q9UGK3 403 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 SRRDQ9UH36 339 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 MYPNQ86TC9 1320 aa10.84□□□□□ -0.67
UBE2N-206ENST00000552442 TNRC18O15417 2968 aaPredicted RBP10.83□□□□□ -0.68
UBE2N-206ENST00000552442 GSG1L2A8MUP6 293 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 M0R2C6 588 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 GNAT2P19087 354 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 HOXA7P31268 230 aaPredicted RBP10.83□□□□□ -0.68
UBE2N-206ENST00000552442 GUCY1A2P33402 732 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 USP14P54578 494 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 PDE1AP54750 535 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 MLLT1Q03111 559 aaPredicted RBP10.83□□□□□ -0.68
UBE2N-206ENST00000552442 SEPT2Q15019 361 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 FAM110CQ1W6H9 321 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 TUSC1Q2TAM9 212 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 B4GALNT3Q6L9W6 998 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 CTR9Q6PD62 1173 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 RNF19BQ6ZMZ0 732 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 TMEM179Q6ZVK1 233 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 C12orf42Q96LP6 360 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 GOPCQ9HD26 462 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 LIMD1Q9UGP4 676 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 A0A0G2JMZ2 1700 aa10.83□□□□□ -0.68
UBE2N-206ENST00000552442 SMIM22K7EJ46 135 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 TNPO2O14787 897 aaKnown RBP10.82□□□□□ -0.68
UBE2N-206ENST00000552442 IGHDP01880 384 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 AKR1B1P15121 316 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 TDO2P48775 406 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 CDK8P49336 464 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 ZMYM1Q5SVZ6 1142 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 GIMAP6Q6P9H5 292 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 BRICD5Q6PL45 260 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 C16orf86Q6ZW13 317 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 NBPF11Q86T75 865 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 RAET1EQ8TD07 263 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 ACER1Q8TDN7 264 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 EVI5LQ96CN4 794 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 THAP11Q96EK4 314 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 KIAA1683Q9H0B3 1180 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 POLR3EQ9NVU0 708 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 PCDHGC3Q9UN70 934 aa10.82□□□□□ -0.68
UBE2N-206ENST00000552442 ZNFX1Q9P2E3 1918 aaKnown RBP10.82□□□□□ -0.68
UBE2N-206ENST00000552442 LAMA4Q16363 1823 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 ROBO3Q96MS0 1386 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 MINDY4BA8MYZ0 360 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 APPP05067 770 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 HERVK_113P62684 666 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 IRX6P78412 446 aaPredicted RBP10.81□□□□□ -0.68
UBE2N-206ENST00000552442 PRKCZQ05513 592 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 CSPP1Q1MSJ5 1256 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 SBK1Q52WX2 424 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 PRPF38BQ5VTL8 546 aaKnown RBP10.81□□□□□ -0.68
UBE2N-206ENST00000552442 CHD1LQ86WJ1 897 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 SH3TC2Q8TF17 1288 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 GTF3C2Q8WUA4 911 aaPredicted RBP10.81□□□□□ -0.68
UBE2N-206ENST00000552442 ZNF333Q96JL9 665 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 CCDC17Q96LX7 622 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 SEC62Q99442 399 aaKnown RBP10.81□□□□□ -0.68
UBE2N-206ENST00000552442 P2RX7Q99572 595 aaKnown RBP10.81□□□□□ -0.68
UBE2N-206ENST00000552442 EPB41L4AQ9HCS5 686 aaPredicted RBP10.81□□□□□ -0.68
UBE2N-206ENST00000552442 MORF4L1Q9UBU8 362 aa10.81□□□□□ -0.68
UBE2N-206ENST00000552442 USP17L15C9J2P7 530 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 USP17L13C9JLJ4 530 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 USP17L11C9JVI0 530 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 USP17L18D6R9N7 530 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 USP17L22D6RA61 530 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 USP17L17D6RBQ6 530 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 USP17L19D6RCP7 530 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 USP17L20D6RJB6 530 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 VCAM1P19320 739 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 NUCB1Q02818 461 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 ICA1Q05084 483 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 USP17L24Q0WX57 530 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 RETREG3Q86VR2 466 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 CLEC10AQ8IUN9 316 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 NKX2-3Q8TAU0 364 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 COA7Q96BR5 231 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 PCMTD1Q96MG8 357 aaPredicted RBP10.8□□□□□ -0.68
UBE2N-206ENST00000552442 NACAP1Q9BZK3 213 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 SH2D4AQ9H788 454 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 ARHGEF10LQ9HCE6 1279 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 GABRQQ9UN88 632 aa10.8□□□□□ -0.68
UBE2N-206ENST00000552442 A0A1W2PRG0 241 aa10.79□□□□□ -0.68
UBE2N-206ENST00000552442 PATL2C9JE40 543 aaKnown RBP10.79□□□□□ -0.68
UBE2N-206ENST00000552442 MYCP01106 439 aaPredicted RBP10.79□□□□□ -0.68
UBE2N-206ENST00000552442 GRK4P32298 578 aa10.79□□□□□ -0.68
UBE2N-206ENST00000552442 GGCXP38435 758 aa10.79□□□□□ -0.68
UBE2N-206ENST00000552442 FLT3LGP49771 235 aa10.79□□□□□ -0.68
UBE2N-206ENST00000552442 MSS51Q4VC12 460 aa10.79□□□□□ -0.68
UBE2N-206ENST00000552442 CATSPERGQ6ZRH7 1159 aa10.79□□□□□ -0.68
UBE2N-206ENST00000552442 IFNL3Q8IZI9 196 aa10.79□□□□□ -0.68
UBE2N-206ENST00000552442 STK11IPQ8N1F8 1099 aa10.79□□□□□ -0.68
UBE2N-206ENST00000552442 USB1Q9BQ65 265 aaKnown RBP10.79□□□□□ -0.68
UBE2N-206ENST00000552442 PAGR1Q9BTK6 254 aa10.79□□□□□ -0.68
UBE2N-206ENST00000552442 SLC6A16Q9GZN6 736 aa10.79□□□□□ -0.68
UBE2N-206ENST00000552442 NAPBQ9H115 298 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms