RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ZNF333Q96JL9 665 aa21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 TEX13BQ9BXU2 312 aa21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 SLC15A5A6NIM6 579 aa21.67■■□□□ 1.06
PRPF40B-216ENST00000552301 STOX1Q6ZVD7 989 aa21.67■■□□□ 1.06
PRPF40B-216ENST00000552301 RASGRP2Q7LDG7 609 aa21.67■■□□□ 1.06
PRPF40B-216ENST00000552301 RIOX2Q8IUF8 465 aa21.67■■□□□ 1.06
PRPF40B-216ENST00000552301 CPXCR1Q8N123 301 aa21.67■■□□□ 1.06
PRPF40B-216ENST00000552301 PNMA1Q8ND90 353 aa21.67■■□□□ 1.06
PRPF40B-216ENST00000552301 PXYLP1Q8TE99 480 aa21.67■■□□□ 1.06
PRPF40B-216ENST00000552301 GJD2Q9UKL4 321 aa21.67■■□□□ 1.06
PRPF40B-216ENST00000552301 TAF6LQ9Y6J9 622 aa21.67■■□□□ 1.06
PRPF40B-216ENST00000552301 FRMPD2Q68DX3 1309 aaPredicted RBP21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 PLA2G6O60733 806 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 REC8O95072 547 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 MYCP01106 439 aaPredicted RBP21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 PDHBP11177 359 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 ELNP15502 786 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 PTPREP23469 700 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 SLC4A3P48751 1232 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 SOX10P56693 466 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 SNRNP48Q6IEG0 339 aaKnown RBP21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 CYB5R4Q7L1T6 521 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 REPS2Q8NFH8 660 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 ANKS1AQ92625 1134 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 APBA2Q99767 749 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 TMEM106CQ9BVX2 250 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 SLC38A10Q9HBR0 1119 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 GPCPD1Q9NPB8 672 aa21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 ZNF214Q9UL59 606 aaPredicted RBP21.66■■□□□ 1.06
PRPF40B-216ENST00000552301 IFIT3O14879 490 aaKnown RBP21.65■■□□□ 1.06
PRPF40B-216ENST00000552301 STRNO43815 780 aa21.65■■□□□ 1.06
PRPF40B-216ENST00000552301 MAP2K5Q13163 448 aa21.65■■□□□ 1.06
PRPF40B-216ENST00000552301 NECTIN1Q15223 517 aa21.65■■□□□ 1.06
PRPF40B-216ENST00000552301 MORN1Q5T089 497 aa21.65■■□□□ 1.06
PRPF40B-216ENST00000552301 PLXNB2O15031 1838 aa21.64■■□□□ 1.06
PRPF40B-216ENST00000552301 HMGCRP04035 888 aa21.64■■□□□ 1.05
PRPF40B-216ENST00000552301 ZKSCAN1P17029 563 aaPredicted RBP21.64■■□□□ 1.05
PRPF40B-216ENST00000552301 OAZ1P54368 228 aa21.64■■□□□ 1.05
PRPF40B-216ENST00000552301 ZNF543Q08ER8 600 aa21.64■■□□□ 1.05
PRPF40B-216ENST00000552301 GRB14Q14449 540 aa21.64■■□□□ 1.05
PRPF40B-216ENST00000552301 GPATCH4Q5T3I0 446 aaKnown RBP21.64■■□□□ 1.05
PRPF40B-216ENST00000552301 TRMT44Q8IYL2 757 aaKnown RBP21.64■■□□□ 1.05
PRPF40B-216ENST00000552301 RAVER2Q9HCJ3 691 aaKnown RBP21.64■■□□□ 1.05
PRPF40B-216ENST00000552301 PRR12Q9ULL5 1215 aa21.64■■□□□ 1.05
PRPF40B-216ENST00000552301 ATP2A1O14983 1001 aa21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 INHAP05111 366 aa21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 SNHG28P0DPA3 235 aa21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 FCER1AP12319 257 aa21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 XRCC5P13010 732 aaKnown RBP21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 WTAPQ15007 396 aa21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 TMEM67Q5HYA8 995 aa21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 SYDE2Q5VT97 1194 aa21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 DPP9Q86TI2 863 aa21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 MB21D2Q8IYB1 491 aaPredicted RBP21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 MMP19Q99542 508 aa21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 SLC5A4Q9NY91 659 aa21.63■■□□□ 1.05
PRPF40B-216ENST00000552301 KIAA0100Q14667 2235 aaKnown RBP21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 ADORA2AP29274 412 aa21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 MCM5P33992 734 aa21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 SLC16A2P36021 539 aa21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 KCTD2Q14681 263 aa21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 SEC23AQ15436 765 aa21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 ASPRV1Q53RT3 343 aa21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 TTBK2Q6IQ55 1244 aa21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 CHST3Q7LGC8 479 aa21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 ABRAQ8N0Z2 381 aa21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 USP6NLQ92738 828 aa21.62■■□□□ 1.05
PRPF40B-216ENST00000552301 PARP1P09874 1014 aaKnown RBP21.61■■□□□ 1.05
PRPF40B-216ENST00000552301 KRT32Q14532 448 aa21.61■■□□□ 1.05
PRPF40B-216ENST00000552301 CCDC174Q6PII3 467 aa21.61■■□□□ 1.05
PRPF40B-216ENST00000552301 BTNL9Q6UXG8 535 aa21.61■■□□□ 1.05
PRPF40B-216ENST00000552301 FBXO40Q9UH90 709 aa21.61■■□□□ 1.05
PRPF40B-216ENST00000552301 ZNF236Q9UL36 1845 aa21.61■■□□□ 1.05
PRPF40B-216ENST00000552301 PRC1O43663 620 aa21.6■■□□□ 1.05
PRPF40B-216ENST00000552301 GOLGA8HP0CJ92 632 aa21.6■■□□□ 1.05
PRPF40B-216ENST00000552301 TRIB2Q92519 343 aa21.6■■□□□ 1.05
PRPF40B-216ENST00000552301 DHX16O60231 1041 aaKnown RBP21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 HOXC6P09630 235 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 CCL5P13501 91 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 RGS19P49795 217 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 ANTXR2P58335 489 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 SNAP25P60880 206 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 MTFR1Q15390 333 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 MFSD14CQ5VZR4 134 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 CHST13Q8NET6 341 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 TMEM87BQ96K49 555 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 MTA3Q9BTC8 594 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 RNF208Q9H0X6 261 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 HOMER2Q9NSB8 354 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 PNMA2Q9UL42 364 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 CCPG1Q9ULG6 757 aa21.59■■□□□ 1.05
PRPF40B-216ENST00000552301 ALAS1P13196 640 aa21.58■■□□□ 1.05
PRPF40B-216ENST00000552301 TKFCQ3LXA3 575 aa21.58■■□□□ 1.05
PRPF40B-216ENST00000552301 NFXL1Q6ZNB6 911 aa21.58■■□□□ 1.05
PRPF40B-216ENST00000552301 CATIPQ7Z7H3 387 aa21.58■■□□□ 1.05
PRPF40B-216ENST00000552301 NEK1Q96PY6 1258 aa21.58■■□□□ 1.05
PRPF40B-216ENST00000552301 RANBP17Q9H2T7 1088 aaKnown RBP21.58■■□□□ 1.05
PRPF40B-216ENST00000552301 RNF146Q9NTX7 359 aa21.58■■□□□ 1.05
PRPF40B-216ENST00000552301 RIPK3Q9Y572 518 aa21.58■■□□□ 1.05
PRPF40B-216ENST00000552301 CCL14Q16627 93 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms