RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 PDHBP11177 359 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 TXLNAP40222 546 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 MAP3K9P80192 1104 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 BLIDQ8IZY5 108 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 TSKSQ9UJT2 592 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 COL4A1P02462 1669 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 TECP42680 631 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 SNRNP48Q6IEG0 339 aaKnown RBP9.32□□□□□ -0.92
CHPT1-208ENST00000552215 PURBQ96QR8 312 aaKnown RBP9.32□□□□□ -0.92
CHPT1-208ENST00000552215 SCAND2PQ9GZW5 306 aaPredicted RBP9.32□□□□□ -0.92
CHPT1-208ENST00000552215 TAF1DQ9H5J8 278 aaPredicted RBP9.32□□□□□ -0.92
CHPT1-208ENST00000552215 FAM13BQ9NYF5 915 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 PCDHB6Q9Y5E3 794 aa9.32□□□□□ -0.92
CHPT1-208ENST00000552215 NHSQ6T4R5 1651 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 GAKO14976 1311 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 SALL1Q9NSC2 1324 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 KIF28PB7ZC32 967 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 FDPSP14324 419 aaKnown RBP9.31□□□□□ -0.92
CHPT1-208ENST00000552215 TROAPQ12815 778 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 WWC2Q6AWC2 1192 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 C15orf52Q6ZUT6 534 aaKnown RBP9.31□□□□□ -0.92
CHPT1-208ENST00000552215 CNNM3Q8NE01 707 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 DPF2Q92785 391 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 DNAJC18Q9H819 358 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 HERC5Q9UII4 1024 aaKnown RBP9.31□□□□□ -0.92
CHPT1-208ENST00000552215 SLX4Q8IY92 1834 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 FAM170AA1A519 330 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 BACH1O14867 736 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 IRF6O14896 467 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 IFNAR1P17181 557 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 CDK11BP21127 795 aaKnown RBP9.31□□□□□ -0.92
CHPT1-208ENST00000552215 ST3GAL1Q11201 340 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 VGLL4Q14135 290 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 TTC38Q5R3I4 469 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 ANO1Q5XXA6 986 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 SEPT14Q6ZU15 432 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 ZNF280CQ8ND82 737 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 NUP62CLQ9H1M0 184 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 FZD9O00144 591 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 DDAH1O94760 285 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 MYSM1Q5VVJ2 828 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 NCAPH2Q6IBW4 605 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 TBCKQ8TEA7 893 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 TRIM44Q96DX7 344 aaPredicted RBP9.31□□□□□ -0.92
CHPT1-208ENST00000552215 AMNQ9BXJ7 453 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 ZDHHC9Q9Y397 364 aa9.31□□□□□ -0.92
CHPT1-208ENST00000552215 PCNTO95613 3336 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 FMNL1O95466 1100 aaPredicted RBP9.3□□□□□ -0.92
CHPT1-208ENST00000552215 BRD1O95696 1058 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 HDLBPQ00341 1268 aaKnown RBP9.3□□□□□ -0.92
CHPT1-208ENST00000552215 PNMA8AQ86V59 439 aaPredicted RBP9.3□□□□□ -0.92
CHPT1-208ENST00000552215 NOSTRINQ8IVI9 506 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 OPTNQ96CV9 577 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 FAM163AQ96GL9 167 aaPredicted RBP9.3□□□□□ -0.92
CHPT1-208ENST00000552215 TBC1D7Q9P0N9 293 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 SIPA1L3O60292 1781 aaPredicted RBP9.3□□□□□ -0.92
CHPT1-208ENST00000552215 GOLGA6L19H0YKK7 550 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 PTGDRQ13258 359 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 NONOQ15233 471 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHPT1-208ENST00000552215 RCSD1Q6JBY9 416 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 ANKRD13CQ8N6S4 541 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 PPP1R13LQ8WUF5 828 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 CCDC34Q96HJ3 373 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 SGIP1Q9BQI5 828 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 ZSCAN16Q9H4T2 348 aaPredicted RBP9.3□□□□□ -0.92
CHPT1-208ENST00000552215 PRR12Q9ULL5 1215 aa9.3□□□□□ -0.92
CHPT1-208ENST00000552215 CCL15-CCL14A0A0B4J2E2 113 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 CUL4AQ13619 759 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 GSE1Q14687 1217 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 CCL15Q16663 113 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 GPATCH4Q5T3I0 446 aaKnown RBP9.29□□□□□ -0.92
CHPT1-208ENST00000552215 ARHGEF16Q5VV41 709 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 GPIHBP1Q8IV16 184 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 LEO1Q8WVC0 666 aaPredicted RBP9.29□□□□□ -0.92
CHPT1-208ENST00000552215 LLPHQ9BRT6 129 aaKnown RBP9.29□□□□□ -0.92
CHPT1-208ENST00000552215 GBA2Q9HCG7 927 aaPredicted RBP9.29□□□□□ -0.92
CHPT1-208ENST00000552215 TCP11L1Q9NUJ3 509 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 CASP1P29466 404 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 SYKP43405 635 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 CACNB1Q02641 598 aaPredicted RBP9.29□□□□□ -0.92
CHPT1-208ENST00000552215 ZNF543Q08ER8 600 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 DPP9Q86TI2 863 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 GRAMD1CQ8IYS0 662 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 SPC24Q8NBT2 197 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 SCLT1Q96NL6 688 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 C10orf71Q711Q0 1435 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 MEIS1O00470 390 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 POLR2DO15514 142 aaKnown RBP9.29□□□□□ -0.92
CHPT1-208ENST00000552215 STX17P56962 302 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 SEC23AQ15436 765 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 ASPRV1Q53RT3 343 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 CEP57L1Q8IYX8 460 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 PCMTD1Q96MG8 357 aaPredicted RBP9.29□□□□□ -0.92
CHPT1-208ENST00000552215 IDI2Q9BXS1 227 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 BLZF1Q9H2G9 400 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.29□□□□□ -0.92
CHPT1-208ENST00000552215 PDE4DIPQ5VU43 2346 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 PP2D1A8MPX8 630 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 PGK2P07205 417 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 KIF23Q02241 960 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms