RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 ZBTB40Q9NUA8 1239 aa26.02■■□□□ 1.76
SMARCD1-212ENST00000551966 DNAJC25-GNG10A0A024R161 153 aa26.01■■□□□ 1.75
SMARCD1-212ENST00000551966 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.01■■□□□ 1.75
SMARCD1-212ENST00000551966 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.01■■□□□ 1.75
SMARCD1-212ENST00000551966 COPB2P35606 906 aa26.01■■□□□ 1.75
SMARCD1-212ENST00000551966 MAMDC4Q6UXC1 1216 aa26.01■■□□□ 1.75
SMARCD1-212ENST00000551966 CDH23Q9H251 3354 aa26.01■■□□□ 1.75
SMARCD1-212ENST00000551966 STARD7Q9NQZ5 370 aa26.01■■□□□ 1.75
SMARCD1-212ENST00000551966 FAM184BQ9ULE4 1060 aa26.01■■□□□ 1.75
SMARCD1-212ENST00000551966 SYNRGQ9UMZ2 1314 aa26.01■■□□□ 1.75
SMARCD1-212ENST00000551966 MYADML2A6NDP7 307 aa26■■□□□ 1.75
SMARCD1-212ENST00000551966 DCDC2CA8MYV0 355 aa26■■□□□ 1.75
SMARCD1-212ENST00000551966 MSL3Q8N5Y2 521 aaKnown RBP26■■□□□ 1.75
SMARCD1-212ENST00000551966 SLF1Q9BQI6 1058 aa26■■□□□ 1.75
SMARCD1-212ENST00000551966 SPTBN5Q9NRC6 3674 aaKnown RBP26■■□□□ 1.75
SMARCD1-212ENST00000551966 SYNGAP1Q96PV0 1343 aa25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 F5H6K3 240 aa25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 HMMRO75330 724 aa25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 TIMP1P01033 207 aa25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 KLRC3Q07444 240 aa25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 SNRNP48Q6IEG0 339 aaKnown RBP25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 C16orf59Q7L2K0 433 aa25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 NUP133Q8WUM0 1156 aa25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 DDX11Q96FC9 970 aa25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 DDRGK1Q96HY6 314 aa25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 TEX13BQ9BXU2 312 aa25.99■■□□□ 1.75
SMARCD1-212ENST00000551966 MOXD2PA6NHM9 499 aa25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 ADCY6O43306 1168 aa25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 RASA1P20936 1047 aa25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 DNAJB2P25686 324 aa25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 CDK7P50613 346 aa25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 STK11IPQ8N1F8 1099 aa25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 USP38Q8NB14 1042 aa25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 STRBPQ96SI9 672 aaKnown RBP25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.98■■□□□ 1.754e-6■■■□□ 18.8
SMARCD1-212ENST00000551966 NYAP2Q9P242 653 aa25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 TBX21Q9UL17 535 aa25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 COG6Q9Y2V7 657 aa25.98■■□□□ 1.75
SMARCD1-212ENST00000551966 DUSP11O75319 330 aaKnown RBP25.97■■□□□ 1.75
SMARCD1-212ENST00000551966 SBK1Q52WX2 424 aa25.97■■□□□ 1.75
SMARCD1-212ENST00000551966 FGD4Q96M96 766 aa25.97■■□□□ 1.75
SMARCD1-212ENST00000551966 PRDM6Q9NQX0 595 aa25.97■■□□□ 1.75
SMARCD1-212ENST00000551966 ZHX1Q9UKY1 873 aaPredicted RBP25.97■■□□□ 1.75
SMARCD1-212ENST00000551966 GREB1LQ9C091 1923 aaPredicted RBP25.96■■□□□ 1.75
SMARCD1-212ENST00000551966 GSG1L2A8MUP6 293 aa25.96■■□□□ 1.75
SMARCD1-212ENST00000551966 NDUFB10O96000 172 aa25.96■■□□□ 1.75
SMARCD1-212ENST00000551966 SLC4A3P48751 1232 aa25.96■■□□□ 1.75
SMARCD1-212ENST00000551966 ACVR2BQ13705 512 aa25.96■■□□□ 1.75
SMARCD1-212ENST00000551966 MFSD5Q6N075 450 aa25.96■■□□□ 1.75
SMARCD1-212ENST00000551966 CPXCR1Q8N123 301 aa25.96■■□□□ 1.75
SMARCD1-212ENST00000551966 PRPF38AQ8NAV1 312 aaKnown RBP25.96■■□□□ 1.75
SMARCD1-212ENST00000551966 ZNF576Q9H609 170 aa25.96■■□□□ 1.75
SMARCD1-212ENST00000551966 ARPP21Q9UBL0 812 aaPredicted RBP25.96■■□□□ 1.75
SMARCD1-212ENST00000551966 ATP2A1O14983 1001 aa25.95■■□□□ 1.74
SMARCD1-212ENST00000551966 ZSCAN25Q6NSZ9 544 aa25.95■■□□□ 1.74
SMARCD1-212ENST00000551966 ZNF467Q7Z7K2 595 aaPredicted RBP25.95■■□□□ 1.74
SMARCD1-212ENST00000551966 ELP1O95163 1332 aa25.94■■□□□ 1.74
SMARCD1-212ENST00000551966 IGKV6D-41A0A0C4DH26 115 aa25.94■■□□□ 1.74
SMARCD1-212ENST00000551966 ASGR1P07306 291 aa25.94■■□□□ 1.74
SMARCD1-212ENST00000551966 MS4A1P11836 297 aa25.94■■□□□ 1.74
SMARCD1-212ENST00000551966 CST5P28325 142 aaPredicted RBP25.94■■□□□ 1.74
SMARCD1-212ENST00000551966 TMEM240Q5SV17 173 aa25.94■■□□□ 1.74
SMARCD1-212ENST00000551966 RAVER2Q9HCJ3 691 aaKnown RBP25.94■■□□□ 1.74
SMARCD1-212ENST00000551966 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.94■■□□□ 1.74
SMARCD1-212ENST00000551966 CLIP2Q9UDT6 1046 aa25.94■■□□□ 1.74
SMARCD1-212ENST00000551966 DDX19BQ9UMR2 479 aa25.94■■□□□ 1.74
SMARCD1-212ENST00000551966 GRXCR1A8MXD5 290 aa25.93■■□□□ 1.74
SMARCD1-212ENST00000551966 RASIP1Q5U651 963 aa25.93■■□□□ 1.74
SMARCD1-212ENST00000551966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.93■■□□□ 1.74
SMARCD1-212ENST00000551966 SYMPKQ92797 1274 aaKnown RBP25.93■■□□□ 1.74
SMARCD1-212ENST00000551966 GLT1D1Q96MS3 346 aa25.93■■□□□ 1.74
SMARCD1-212ENST00000551966 MKNK2Q9HBH9 465 aa25.93■■□□□ 1.74
SMARCD1-212ENST00000551966 MYH7P12883 1935 aa25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 MINDY4BA8MYZ0 360 aa25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 CTAGE5O15320 804 aa25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 SMARCA5O60264 1052 aaPredicted RBP25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 ZBED4O75132 1171 aa25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 C6orf222P0C671 652 aaPredicted RBP25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 PBX2P40425 430 aa25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 GJA9P57773 515 aa25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 CCDC144BQ3MJ40 725 aa25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 TIFAQ96CG3 184 aa25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 UPF3AQ9H1J1 476 aaKnown RBP25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 SLC38A10Q9HBR0 1119 aa25.92■■□□□ 1.74
SMARCD1-212ENST00000551966 CSF2RAP15509 400 aa25.91■■□□□ 1.74
SMARCD1-212ENST00000551966 PCSK9Q8NBP7 692 aaKnown RBP25.91■■□□□ 1.74
SMARCD1-212ENST00000551966 OSBP2Q969R2 916 aa25.91■■□□□ 1.74
SMARCD1-212ENST00000551966 MKL1Q969V6 931 aa25.91■■□□□ 1.74
SMARCD1-212ENST00000551966 KIFC2Q96AC6 838 aa25.91■■□□□ 1.74
SMARCD1-212ENST00000551966 KATNBL1Q9H079 304 aa25.91■■□□□ 1.74
SMARCD1-212ENST00000551966 ABHD16BQ9H3Z7 469 aa25.91■■□□□ 1.74
SMARCD1-212ENST00000551966 ARVCFO00192 962 aa25.9■■□□□ 1.74
SMARCD1-212ENST00000551966 PPIGQ13427 754 aaKnown RBP eCLIP25.9■■□□□ 1.74
SMARCD1-212ENST00000551966 GNASQ5JWF2 1037 aa25.9■■□□□ 1.74
SMARCD1-212ENST00000551966 GIMAP6Q6P9H5 292 aa25.9■■□□□ 1.74
SMARCD1-212ENST00000551966 ANKRD35Q8N283 1001 aa25.9■■□□□ 1.74
SMARCD1-212ENST00000551966 VTI1AQ96AJ9 217 aa25.9■■□□□ 1.74
SMARCD1-212ENST00000551966 PBX4Q9BYU1 374 aa25.9■■□□□ 1.74
SMARCD1-212ENST00000551966 MROH7Q68CQ1 1323 aa25.89■■□□□ 1.74
SMARCD1-212ENST00000551966 ACRP10323 421 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms