RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
PFKM-223	ENST00000551485	FAM184B	Q9ULE4	1060 aa		12.8	□□□□□ -0.36
PFKM-223	ENST00000551485	SYNGAP1	Q96PV0	1343 aa		12.8	□□□□□ -0.36
PFKM-223	ENST00000551485	MYADML2	A6NDP7	307 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	USP17L12	C9JPN9	530 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	USP17L21	D6R901	530 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	TNFRSF10A	O00220	468 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	RAD21	O60216	631 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	DUSP11	O75319	330 aa	Known RBP	12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	SNAI1	O95863	264 aa	Predicted RBP	12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	IFIT2	P09913	472 aa	Known RBP	12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	CST5	P28325	142 aa	Predicted RBP	12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	PPIG	Q13427	754 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	MFSD5	Q6N075	450 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	TEX13B	Q9BXU2	312 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	PAG1	Q9NWQ8	432 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	CHD9	Q3L8U1	2897 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	GREB1L	Q9C091	1923 aa	Predicted RBP	12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	MROH7	Q68CQ1	1323 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	ZBED9	Q6R2W3	1325 aa		12.79	□□□□□ -0.36
PFKM-223	ENST00000551485	MYH7	P12883	1935 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	MCM3AP	O60318	1980 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	DNAJC25-GNG10	A0A024R161	153 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	APBB1	O00213	710 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	TMEM240	Q5SV17	173 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	RASIP1	Q5U651	963 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	SNRNP48	Q6IEG0	339 aa	Known RBP	12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	CCDC174	Q6PII3	467 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	MAMDC4	Q6UXC1	1216 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	DDX11	Q96FC9	970 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	DDRGK1	Q96HY6	314 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	GLT1D1	Q96MS3	346 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	GAS2L1	Q99501	681 aa	Predicted RBP	12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	SLF1	Q9BQI6	1058 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	PBX4	Q9BYU1	374 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	ELP1	O95163	1332 aa		12.78	□□□□□ -0.36
PFKM-223	ENST00000551485	CHD7	Q9P2D1	2997 aa		12.77	□□□□□ -0.36
PFKM-223	ENST00000551485	C6orf222	P0C671	652 aa	Predicted RBP	12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	COL9A1	P20849	921 aa		12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	PBX2	P40425	430 aa		12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	CDK7	P50613	346 aa		12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	AKNAD1	Q5T1N1	836 aa		12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	CCDC129	Q6ZRS4	1044 aa		12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	C16orf59	Q7L2K0	433 aa		12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	PCSK9	Q8NBP7	692 aa	Known RBP	12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	ATXN2L	Q8WWM7	1075 aa	Known RBP	12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	NUP88	Q99567	741 aa	Predicted RBP	12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	UPF3A	Q9H1J1	476 aa	Known RBP	12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	BOLA2	Q9H3K6	86 aa		12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	PRDM12	Q9H4Q4	367 aa		12.77	□□□□□ -0.37
PFKM-223	ENST00000551485	RIPK3	Q9Y572	518 aa		12.77	□□□□□ -0.37
PFKM-223	ENST00000551485		A0A0U1RQG5	324 aa	Predicted RBP	12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	GRXCR1	A8MXD5	290 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	ARVCF	O00192	962 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	ADCY6	O43306	1168 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	CHGB	P05060	677 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	ASGR1	P07306	291 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	CSF2RA	P15509	400 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	IRX5	P78411	483 aa	Predicted RBP	12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	ACVR2B	Q13705	512 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	UBE3C	Q15386	1083 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	CTR9	Q6PD62	1173 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	TMEM199	Q8N511	208 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	PPM1E	Q8WY54	764 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	SPC25	Q9HBM1	224 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	THEG	Q9P2T0	379 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	SLC4A4	Q9Y6R1	1079 aa		12.76	□□□□□ -0.37
PFKM-223	ENST00000551485	ATP2A1	O14983	1001 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	NDUFB10	O96000	172 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	ATP5J	P18859	108 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	GJA9	P57773	515 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	ZNF365	Q70YC5	407 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	FAM126B	Q8IXS8	530 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	CPXCR1	Q8N123	301 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	PRPF38A	Q8NAV1	312 aa	Known RBP	12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	PANK1	Q8TE04	598 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	VTI1A	Q96AJ9	217 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	FGD4	Q96M96	766 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	HAUS7	Q99871	368 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	PPP1R12C	Q9BZL4	782 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	BCL11A	Q9H165	835 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	ABHD16B	Q9H3Z7	469 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	NYAP2	Q9P242	653 aa		12.75	□□□□□ -0.37
PFKM-223	ENST00000551485	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.75	□□□□□ -0.37
PFKM-223	ENST00000551485		F5H6K3	240 aa		12.74	□□□□□ -0.37
PFKM-223	ENST00000551485	TLR3	O15455	904 aa	Known RBP	12.74	□□□□□ -0.37
PFKM-223	ENST00000551485	RAB11FIP3	O75154	756 aa		12.74	□□□□□ -0.37
PFKM-223	ENST00000551485	HMMR	O75330	724 aa		12.74	□□□□□ -0.37
PFKM-223	ENST00000551485	ACR	P10323	421 aa		12.74	□□□□□ -0.37
PFKM-223	ENST00000551485	RASA1	P20936	1047 aa		12.74	□□□□□ -0.37
PFKM-223	ENST00000551485	SLC4A3	P48751	1232 aa		12.74	□□□□□ -0.37
PFKM-223	ENST00000551485	KLRC3	Q07444	240 aa		12.74	□□□□□ -0.37
PFKM-223	ENST00000551485	ADGRE1	Q14246	886 aa		12.74	□□□□□ -0.37

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