RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 PRCPP42785 496 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 NEDD9Q14511 834 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 CCDC57Q2TAC2 916 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 MMGT1Q8N4V1 131 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.67□□□□□ -0.22
ERBB3-219ENST00000551242 PIH1D3Q9NQM4 214 aaKnown RBP13.67□□□□□ -0.22
ERBB3-219ENST00000551242 CAPN6Q9Y6Q1 641 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 ZNF532Q9HCE3 1301 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 NBPF26B4DH59 902 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 IPO7O95373 1038 aaKnown RBP13.67□□□□□ -0.22
ERBB3-219ENST00000551242 DEXIO95424 95 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 EPB41P11171 864 aaKnown RBP13.67□□□□□ -0.22
ERBB3-219ENST00000551242 PMS1P54277 932 aaKnown RBP13.67□□□□□ -0.22
ERBB3-219ENST00000551242 HSPA2P54652 639 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 HDLBPQ00341 1268 aaKnown RBP13.67□□□□□ -0.22
ERBB3-219ENST00000551242 SF3B2Q13435 895 aaKnown RBP13.67□□□□□ -0.22
ERBB3-219ENST00000551242 CCDC40Q4G0X9 1142 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 NBPF10Q6P3W6 841 aaKnown RBP13.67□□□□□ -0.22
ERBB3-219ENST00000551242 NFRKBQ6P4R8 1299 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 CCDC13Q8IYE1 715 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 NBPF15Q8N660 670 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 MLXIPQ9HAP2 919 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 LRWD1Q9UFC0 647 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 MCM8Q9UJA3 840 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 CAPN11Q9UMQ6 739 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 SNX12Q9UMY4 172 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 SPEF2Q9C093 1822 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 ANO9A1A5B4 782 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 SSBP05455 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
ERBB3-219ENST00000551242 EPHB4P54760 987 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 ZNF473Q8WTR7 871 aaKnown RBP13.66□□□□□ -0.22
ERBB3-219ENST00000551242 EPN3Q9H201 632 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 ARFGEF2Q9Y6D5 1785 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 ESYT3A0FGR9 886 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 LGALS16A8MUM7 142 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 B4DLN1 442 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 FAM153BP0C7A2 387 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 TCIRG1Q13488 830 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 CCDC96Q2M329 555 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 FAM153CQ494X1 144 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 ALS2CLQ60I27 953 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 HAUS3Q68CZ6 603 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 CCDC43Q96MW1 224 aaKnown RBP13.66□□□□□ -0.22
ERBB3-219ENST00000551242 STIM2Q9P246 746 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 FAM153AQ9UHL3 310 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 ZSCAN5CA6NGD5 496 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-219ENST00000551242 ZNF233A6NK53 670 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 ZNF263O14978 683 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 PLEKP08567 350 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-219ENST00000551242 TRIM21P19474 475 aaKnown RBP13.66□□□□□ -0.22
ERBB3-219ENST00000551242 CYLC1P35663 651 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-219ENST00000551242 KIF5AQ12840 1032 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 CCT8L2Q96SF2 557 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 VCPKMTQ9H867 229 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 EPB41L4AQ9HCS5 686 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-219ENST00000551242 ODF2LQ9ULJ1 636 aa13.66□□□□□ -0.22
ERBB3-219ENST00000551242 ATXN2Q99700 1313 aaKnown RBP13.65□□□□□ -0.22
ERBB3-219ENST00000551242 CCDC189A1A4V9 331 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 NCK2O43639 380 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 C21orf2O43822 256 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 MOCS3O95396 460 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 PDHBP11177 359 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 NF2P35240 595 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 PREPLQ4J6C6 727 aaPredicted RBP13.65□□□□□ -0.22
ERBB3-219ENST00000551242 EMBQ6PCB8 327 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 ZNF507Q8TCN5 953 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 SLC40A1Q9NP59 571 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 PHKG2P15735 406 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 PTGDRQ13258 359 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 WTAPQ15007 396 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 MEA1Q16626 185 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 PTGISQ16647 500 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 CEP85LQ5SZL2 805 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 RPAINQ86UA6 219 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 RAPGEF4Q8WZA2 1011 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.22
ERBB3-219ENST00000551242 MIEF2Q96C03 454 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 PURBQ96QR8 312 aaKnown RBP13.65□□□□□ -0.22
ERBB3-219ENST00000551242 NFU1Q9UMS0 254 aa13.65□□□□□ -0.22
ERBB3-219ENST00000551242 MYH13Q9UKX3 1938 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 RASSF10A6NK89 507 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 PPP1R37O75864 691 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 RASSF9O75901 435 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 CARSP49589 748 aaKnown RBP13.64□□□□□ -0.23
ERBB3-219ENST00000551242 GUCY2FP51841 1108 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 SMTNP53814 917 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 ZNF658Q5TYW1 1059 aaPredicted RBP13.64□□□□□ -0.23
ERBB3-219ENST00000551242 PDXDC2PQ6P474 469 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 MICALCLQ6ZW33 695 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 NLRP14Q86W24 1093 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 FNBP4Q8N3X1 1017 aaPredicted RBP13.64□□□□□ -0.23
ERBB3-219ENST00000551242 MYCBPAPQ8TBZ2 947 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 IFT81Q8WYA0 676 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 PCMTD1Q96MG8 357 aaPredicted RBP13.64□□□□□ -0.23
ERBB3-219ENST00000551242 STRBPQ96SI9 672 aaKnown RBP13.64□□□□□ -0.23
ERBB3-219ENST00000551242 OSBPL9Q96SU4 736 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 NAPBQ9H115 298 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms