RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-222	ENST00000550889	C11orf16	Q9NQ32	467 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	MKL2	Q9ULH7	1088 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	MED23	Q9ULK4	1368 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	LRRC37A	A6NMS7	1700 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	COL4A1	P02462	1669 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	PHF20L1	A8MW92	1017 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	PDE8B	O95263	885 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	EGFR	P00533	1210 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	IL15	P40933	162 aa	Predicted RBP	5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	EIF6	P56537	245 aa	Known RBP	5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	MLLT1	Q03111	559 aa	Predicted RBP	5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	C20orf194	Q5TEA3	1177 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	DHX32	Q7L7V1	743 aa	Known RBP	5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	ATG9A	Q7Z3C6	839 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	SSH3	Q8TE77	659 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	EDEM1	Q92611	657 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	PUS3	Q9BZE2	481 aa	Known RBP	5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	COA1	Q9GZY4	146 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	SLC6A14	Q9UN76	642 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	DUOX1	Q9NRD9	1551 aa		5.79	□□□□□ -1.48
ATXN2-222	ENST00000550889	IRS2	Q9Y4H2	1338 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	PNMA6E	A0A0J9YXQ4	647 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889		H3BRB1	525 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	TAF5L	O75529	589 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	FAM13A	O94988	1023 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	MAP3K6	O95382	1288 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	HOXB4	P17483	251 aa	Predicted RBP	5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	KCNJ4	P48050	445 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	CXCL9	Q07325	125 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	TNIP1	Q15025	636 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	LRRC24	Q50LG9	513 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	CEP85	Q6P2H3	762 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	KLHDC4	Q8TBB5	520 aa		5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	TUT1	Q9H6E5	874 aa	Known RBP	5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	FNDC3A	Q9Y2H6	1198 aa	Known RBP	5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	NOP58	Q9Y2X3	529 aa	Known RBP	5.78	□□□□□ -1.48
ATXN2-222	ENST00000550889	LTBP1	Q14766	1721 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	IQCA1L	A6NCM1	817 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	WTIP	A6NIX2	430 aa	Predicted RBP	5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	YDJC	A8MPS7	323 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889		M0R082	166 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	ECE2	O60344	883 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	MMP20	O60882	483 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	DDN	O94850	711 aa	Predicted RBP	5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	ALB	P02768	609 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	CPB1	P15086	417 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	VEGFA	P15692	232 aa	Predicted RBP	5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	PCSK2	P16519	638 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	FGFR2	P21802	821 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	DGKG	P49619	791 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	MMP14	P50281	582 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	PUM3	Q15397	648 aa	Known RBP	5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	METTL24	Q5JXM2	366 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	ALKBH2	Q6NS38	261 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	C8orf86	Q6ZUL3	223 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	FAM35A	Q86V20	835 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	GLYCTK	Q8IVS8	523 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	TTC16	Q8NEE8	873 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	ZNF417	Q8TAU3	575 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	LPIN2	Q92539	896 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	DPF2	Q92785	391 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	ZNF587	Q96SQ5	575 aa	Predicted RBP	5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	STARD13	Q9Y3M8	1113 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	ZNF541	Q9H0D2	1346 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	MYH3	P11055	1940 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	CHD4	Q14839	1912 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	COL4A5	P29400	1685 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	ZNF609	O15014	1411 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	HMMR	O75330	724 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	SASH1	O94885	1247 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	PSAP	P07602	524 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	VIL1	P09327	827 aa	Known RBP	5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	IL1R1	P14778	569 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	RPS12	P25398	132 aa	Known RBP	5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	KCNMA1	Q12791	1236 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	C8orf34	Q49A92	452 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	STRIP1	Q5VSL9	837 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	CIAPIN1	Q6FI81	312 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	KANK3	Q6NY19	840 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	HFE2	Q6ZVN8	426 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	ZNF804A	Q7Z570	1209 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	FBXO33	Q7Z6M2	555 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	TXNRD3	Q86VQ6	643 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	NUDT8	Q8WV74	236 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	FAM84B	Q96KN1	310 aa	Predicted RBP	5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	DBNDD1	Q9H9R9	158 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	CD209	Q9NNX6	404 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	PA2G4	Q9UQ80	394 aa	Known RBP	5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889	AKAP2	Q9Y2D5	859 aa		5.77	□□□□□ -1.49
ATXN2-222	ENST00000550889		A6NHS1	94 aa		5.76	□□□□□ -1.49
ATXN2-222	ENST00000550889	ZBTB42	B2RXF5	422 aa		5.76	□□□□□ -1.49
ATXN2-222	ENST00000550889	SNAP23	O00161	211 aa		5.76	□□□□□ -1.49
ATXN2-222	ENST00000550889	GNB5	O14775	395 aa		5.76	□□□□□ -1.49
ATXN2-222	ENST00000550889	ICMT	O60725	284 aa		5.76	□□□□□ -1.49
ATXN2-222	ENST00000550889	RAD17	O75943	681 aa		5.76	□□□□□ -1.49
ATXN2-222	ENST00000550889	PDGFA	P04085	211 aa		5.76	□□□□□ -1.49
ATXN2-222	ENST00000550889	IFIT1	P09914	478 aa	Known RBP	5.76	□□□□□ -1.49
ATXN2-222	ENST00000550889	KLRK1	P26718	216 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms