RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 CDH23Q9H251 3354 aa13.32□□□□□ -0.28
PFDN5-212ENST00000550880 TCRBV5S4A2TA0A5A2 114 aa13.32□□□□□ -0.28
PFDN5-212ENST00000550880 MRPS5P82675 430 aaKnown RBP13.32□□□□□ -0.28
PFDN5-212ENST00000550880 RAB30Q15771 203 aa13.32□□□□□ -0.28
PFDN5-212ENST00000550880 FAM83BQ5T0W9 1011 aa13.32□□□□□ -0.28
PFDN5-212ENST00000550880 C12orf60Q5U649 245 aa13.32□□□□□ -0.28
PFDN5-212ENST00000550880 PSRC1Q6PGN9 363 aaPredicted RBP13.32□□□□□ -0.28
PFDN5-212ENST00000550880 C16orf86Q6ZW13 317 aa13.32□□□□□ -0.28
PFDN5-212ENST00000550880 KLHDC9Q8NEP7 349 aa13.32□□□□□ -0.28
PFDN5-212ENST00000550880 RHPN1Q8TCX5 695 aa13.32□□□□□ -0.28
PFDN5-212ENST00000550880 LENG1Q96BZ8 264 aaPredicted RBP13.32□□□□□ -0.28
PFDN5-212ENST00000550880 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
PFDN5-212ENST00000550880 TBX21Q9UL17 535 aa13.32□□□□□ -0.28
PFDN5-212ENST00000550880 ZNF214Q9UL59 606 aaPredicted RBP13.32□□□□□ -0.28
PFDN5-212ENST00000550880 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-212ENST00000550880 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 USP17L21D6R901 530 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 MBD4O95243 580 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 C6orf222P0C671 652 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-212ENST00000550880 CST5P28325 142 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-212ENST00000550880 SLC4A3P48751 1232 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 TMEM240Q5SV17 173 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 SNRNP48Q6IEG0 339 aaKnown RBP13.31□□□□□ -0.28
PFDN5-212ENST00000550880 MAMDC4Q6UXC1 1216 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-212ENST00000550880 KIF1BPQ96EK5 621 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 ASB2Q96Q27 587 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 SLF1Q9BQI6 1058 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 PBX4Q9BYU1 374 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 BCL11AQ9H165 835 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 PRDM12Q9H4Q4 367 aa13.31□□□□□ -0.28
PFDN5-212ENST00000550880 SMCHD1A6NHR9 2005 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 TTC28Q96AY4 2481 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 ARVCFO00192 962 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 PRKAB2O43741 272 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 ZBED4O75132 1171 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 SNAI1O95863 264 aaPredicted RBP13.3□□□□□ -0.28
PFDN5-212ENST00000550880 ASGR1P07306 291 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 CSF2RAP15509 400 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 IGFBP4P22692 258 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 CDK7P50613 346 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 ACVR2BQ13705 512 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 GNASQ5JWF2 1037 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 PRPF38AQ8NAV1 312 aaKnown RBP13.3□□□□□ -0.28
PFDN5-212ENST00000550880 ABHD16BQ9H3Z7 469 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 PAG1Q9NWQ8 432 aa13.3□□□□□ -0.28
PFDN5-212ENST00000550880 ZNFX1Q9P2E3 1918 aaKnown RBP13.29□□□□□ -0.28
PFDN5-212ENST00000550880 CYP2D7A0A087X1C5 515 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 GRXCR1A8MXD5 290 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 ADD2P35612 726 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 PBX2P40425 430 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 CCSAPQ6IQ19 270 aaPredicted RBP13.29□□□□□ -0.28
PFDN5-212ENST00000550880 ZSCAN25Q6NSZ9 544 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 ZNF365Q70YC5 407 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 CPXCR1Q8N123 301 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 ANKRD35Q8N283 1001 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 REPS2Q8NFH8 660 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 ADAMTS19Q8TE59 1207 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 UHRF1Q96T88 793 aaPredicted RBP13.29□□□□□ -0.28
PFDN5-212ENST00000550880 PPP1R12CQ9BZL4 782 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 SLC28A3Q9HAS3 691 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.29□□□□□ -0.28
PFDN5-212ENST00000550880 FBXO40Q9UH90 709 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 SLC4A4Q9Y6R1 1079 aa13.29□□□□□ -0.28
PFDN5-212ENST00000550880 DNAJC25-GNG10A0A024R161 153 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 HMMRO75330 724 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 FGBP02675 491 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 ACRP10323 421 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 GJA9P57773 515 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
PFDN5-212ENST00000550880 CCDC144BQ3MJ40 725 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 RASIP1Q5U651 963 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 C16orf59Q7L2K0 433 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 BOLA2Q9H3K6 86 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 MKNK2Q9HBH9 465 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 IL23AQ9NPF7 189 aa13.28□□□□□ -0.28
PFDN5-212ENST00000550880 ARPP21Q9UBL0 812 aaPredicted RBP13.28□□□□□ -0.28
PFDN5-212ENST00000550880 MYADML2A6NDP7 307 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 F5H6K3 240 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 ATP2A1O14983 1001 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 RLBP1P12271 317 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 KLRC3Q07444 240 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 UBE3CQ15386 1083 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 CTR9Q6PD62 1173 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 NOL8Q76FK4 1167 aaKnown RBP13.27□□□□□ -0.29
PFDN5-212ENST00000550880 FAM126BQ8IXS8 530 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 CHST13Q8NET6 341 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 HERVK_113Q902F9 699 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 KIFC2Q96AC6 838 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 NUP88Q99567 741 aaPredicted RBP13.27□□□□□ -0.29
PFDN5-212ENST00000550880 SEZ6LQ9BYH1 1024 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 UPF3AQ9H1J1 476 aaKnown RBP13.27□□□□□ -0.29
PFDN5-212ENST00000550880 NYAP2Q9P242 653 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 RIPK3Q9Y572 518 aa13.27□□□□□ -0.29
PFDN5-212ENST00000550880 ZEB2O60315 1214 aa13.26□□□□□ -0.29
PFDN5-212ENST00000550880 RAB11FIP3O75154 756 aa13.26□□□□□ -0.29
PFDN5-212ENST00000550880 CABYRO75952 493 aa13.26□□□□□ -0.29
PFDN5-212ENST00000550880 MYH8P13535 1937 aa13.26□□□□□ -0.29
PFDN5-212ENST00000550880 ATP5JP18859 108 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms