RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 LIMCH1Q9UPQ0 1083 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 MGAMO43451 1857 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 DOCK3Q8IZD9 2030 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 ADGRA2Q96PE1 1338 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 USP17L15C9J2P7 530 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 USP17L13C9JLJ4 530 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 USP17L11C9JVI0 530 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 USP17L18D6R9N7 530 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 USP17L22D6RA61 530 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 USP17L17D6RBQ6 530 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 USP17L19D6RCP7 530 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 USP17L20D6RJB6 530 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 PEX10O60683 326 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 ADD1P35611 737 aaKnown RBP15.74■□□□□ 0.11
ERBB3-215ENST00000550828 TM4SF4P48230 202 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 METAP2P50579 478 aaKnown RBP eCLIP15.74■□□□□ 0.11
ERBB3-215ENST00000550828 USP17L24Q0WX57 530 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 NTRK3Q16288 839 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 BTNL9Q6UXG8 535 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 TMTC3Q6ZXV5 915 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 IFNL1Q8IU54 200 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 SRBD1Q8N5C6 995 aaKnown RBP15.74■□□□□ 0.11
ERBB3-215ENST00000550828 TMX3Q96JJ7 454 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 TANGO6Q9C0B7 1094 aa15.74■□□□□ 0.11
ERBB3-215ENST00000550828 RBBP6Q7Z6E9 1792 aaKnown RBP15.74■□□□□ 0.11
ERBB3-215ENST00000550828 CNTNAP5Q8WYK1 1306 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 ZNFX1Q9P2E3 1918 aaKnown RBP15.73■□□□□ 0.11
ERBB3-215ENST00000550828 SPDYE16A6NNV3 312 aaPredicted RBP15.73■□□□□ 0.11
ERBB3-215ENST00000550828 TMEM232C9JQI7 657 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 KLRF2D3W0D1 207 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 PDHXO00330 501 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 CTDNEP1O95476 244 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 CALM1P0DP23 149 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 CALM2P0DP24 149 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 CALM3P0DP25 149 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 TAL1P17542 331 aaPredicted RBP15.73■□□□□ 0.11
ERBB3-215ENST00000550828 SNAP25P60880 206 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 CTCFLQ8NI51 663 aaPredicted RBP15.73■□□□□ 0.11
ERBB3-215ENST00000550828 GTF3C6Q969F1 213 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 SNX21Q969T3 373 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 ATG4CQ96DT6 458 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 PPP1R9AQ9ULJ8 1098 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 PRR12Q9ULL5 1215 aa15.73■□□□□ 0.11
ERBB3-215ENST00000550828 ISY1Q9ULR0 285 aaKnown RBP15.73■□□□□ 0.11
ERBB3-215ENST00000550828 LCTP09848 1927 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 PLA2G6O60733 806 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 PPFIA3O75145 1194 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 FLOT1O75955 427 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 CYP2C8P10632 490 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 GPATCH4Q5T3I0 446 aaKnown RBP15.72■□□□□ 0.11
ERBB3-215ENST00000550828 SYDE2Q5VT97 1194 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 SYNE3Q6ZMZ3 975 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 REPS2Q8NFH8 660 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 P2RX7Q99572 595 aaKnown RBP15.72■□□□□ 0.11
ERBB3-215ENST00000550828 SLF1Q9BQI6 1058 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 SLKQ9H2G2 1235 aaPredicted RBP15.72■□□□□ 0.11
ERBB3-215ENST00000550828 FEM1BQ9UK73 627 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 SLC45A1Q9Y2W3 748 aa15.72■□□□□ 0.11
ERBB3-215ENST00000550828 CNMDO75829 334 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 DSG3P32926 999 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 STAT2P52630 851 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 SREBF2Q12772 1141 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
ERBB3-215ENST00000550828 CCDC83Q8IWF9 413 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 MTMR8Q96EF0 704 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 R3HDMLQ9H3Y0 253 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 RIOX1Q9H6W3 641 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 JMJD4Q9H9V9 463 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 SAGE1Q9NXZ1 904 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 ADAMTS5Q9UNA0 930 aa15.71■□□□□ 0.11
ERBB3-215ENST00000550828 PLXNB2O15031 1838 aa15.71■□□□□ 0.1
ERBB3-215ENST00000550828 hCG_1642624A0A1W2PR95 340 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 JAK2O60674 1132 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 PPP1R11O60927 126 aaPredicted RBP15.7■□□□□ 0.1
ERBB3-215ENST00000550828 KIF5BP33176 963 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 MCM2P49736 904 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 INHBEP58166 350 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 HERVK_113P62684 666 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 IRX3P78415 501 aaPredicted RBP15.7■□□□□ 0.1
ERBB3-215ENST00000550828 COG2Q14746 738 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 FAM160B2Q86V87 743 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 ADGRF4Q8IZF3 695 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 CCDC82Q8N4S0 544 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 IL27Q8NEV9 243 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 KIFC2Q96AC6 838 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 SPZ1Q9BXG8 430 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 TXNRD2Q9NNW7 524 aa15.7■□□□□ 0.1
ERBB3-215ENST00000550828 ZCCHC17Q9NP64 241 aaKnown RBP15.7■□□□□ 0.1
ERBB3-215ENST00000550828 RBM28Q9NW13 759 aaKnown RBP15.7■□□□□ 0.1
ERBB3-215ENST00000550828 ZNF536O15090 1300 aa15.69■□□□□ 0.1
ERBB3-215ENST00000550828 MYPNQ86TC9 1320 aa15.69■□□□□ 0.1
ERBB3-215ENST00000550828 VWA5AO00534 786 aa15.69■□□□□ 0.1
ERBB3-215ENST00000550828 IKQ13123 557 aaPredicted RBP15.69■□□□□ 0.1
ERBB3-215ENST00000550828 CUL4AQ13619 759 aa15.69■□□□□ 0.1
ERBB3-215ENST00000550828 LBX2Q6XYB7 198 aa15.69■□□□□ 0.1
ERBB3-215ENST00000550828 NSUN7Q8NE18 718 aaKnown RBP15.69■□□□□ 0.1
ERBB3-215ENST00000550828 CHURC1Q8WUH1 139 aa15.69■□□□□ 0.1
ERBB3-215ENST00000550828 PHKBQ93100 1093 aa15.69■□□□□ 0.1
ERBB3-215ENST00000550828 ZSCAN31Q96LW9 406 aaPredicted RBP15.69■□□□□ 0.1
ERBB3-215ENST00000550828 RANBP17Q9H2T7 1088 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms