RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	ZBTB43	O43298	467 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	CALM1	P0DP23	149 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	CALM2	P0DP24	149 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	CALM3	P0DP25	149 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ANP32A	P39687	249 aa	Known RBP	11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ECE1	P42892	770 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	RCAN1	P53805	252 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PPAT	Q06203	517 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PPIL2	Q13356	520 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	MTMR2	Q13614	643 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SYNE3	Q6ZMZ3	975 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SAPCD2	Q86UD0	394 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	MICU3	Q86XE3	530 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SIAH1	Q8IUQ4	282 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	HSCB	Q8IWL3	235 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	GMCL1P1	Q8NEA9	526 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ACER1	Q8TDN7	264 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PXYLP1	Q8TE99	480 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SLC39A7	Q92504	469 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	MKL1	Q969V6	931 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	OPTN	Q96CV9	577 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SLC10A4	Q96EP9	437 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	WDR18	Q9BV38	432 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	BRPF3	Q9ULD4	1205 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ABT1	Q9ULW3	272 aa	Known RBP	11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	LIMCH1	Q9UPQ0	1083 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TMX2	Q9Y320	296 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PCDHGA10	Q9Y5H3	936 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TLL2	Q9Y6L7	1015 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811	NID2	Q14112	1375 aa		11.11	□□□□□ -0.63
TUBA1A-208	ENST00000550811		A0A1W2PRG0	241 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	GOLGA8A	A7E2F4	631 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	USP17L10	C9JJH3	530 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	C7	P10643	843 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	METAP2	P50579	478 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	USP14	P54578	494 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	EVC	P57679	992 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SPP2	Q13103	211 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ZYX	Q15942	572 aa	Known RBP	11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	NUP133	Q8WUM0	1156 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SNX21	Q969T3	373 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ZNF274	Q96GC6	653 aa	Predicted RBP	11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	MYL10	Q9BUA6	226 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	KIAA1683	Q9H0B3	1180 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	VCPKMT	Q9H867	229 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TPCN1	Q9ULQ1	816 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	MTMR7	Q9Y216	660 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	AFG3L2	Q9Y4W6	797 aa		11.1	□□□□□ -0.63
TUBA1A-208	ENST00000550811	C19orf81	C9J6K1	198 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811		K7ELQ4	463 aa	Predicted RBP	11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	LARGE1	O95461	756 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	NDUFB10	O96000	172 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PDHB	P11177	359 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	RXRA	P19793	462 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PDIA3	P30101	505 aa	Known RBP	11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	APLP1	P51693	650 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	BACE1	P56817	501 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TROAP	Q12815	778 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SLFN13	Q68D06	897 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	RAB11FIP4	Q86YS3	637 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	CTCFL	Q8NI51	663 aa	Predicted RBP	11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	DCAF4	Q8WV16	495 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	LPAR1	Q92633	364 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	WNK4	Q96J92	1243 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SLK	Q9H2G2	1235 aa	Predicted RBP	11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	KCNH4	Q9UQ05	1017 aa		11.09	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PARP14	Q460N5	1801 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811		A0A0G2JLL6	359 aa	Predicted RBP	11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811		F5H6K3	240 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	CXCL11	O14625	94 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	SNHG28	P0DPA3	235 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	ZBTB48	P10074	688 aa	Predicted RBP	11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	KIF5B	P33176	963 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	GJA5	P36382	358 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	SLC1A4	P43007	532 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	ZNF157	P51786	506 aa	Predicted RBP	11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	HMGCS2	P54868	508 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	KLRC3	Q07444	240 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	STK3	Q13188	491 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	SNAPC2	Q13487	334 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	BECN1	Q14457	450 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	GRM4	Q14833	912 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	ME3	Q16798	604 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	RTN1	Q16799	776 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	CCDC96	Q2M329	555 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	ASPRV1	Q53RT3	343 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	RGMB	Q6NW40	437 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	USP17L2	Q6R6M4	530 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	RASGRP2	Q7LDG7	609 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	RASAL3	Q86YV0	1011 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	CCDC144CP	Q8IYA2	1237 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	SPICE1	Q8N0Z3	855 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	GTF3C6	Q969F1	213 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	GMCL1	Q96IK5	515 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	HHIPL1	Q96JK4	782 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	C12orf42	Q96LP6	360 aa		11.08	□□□□□ -0.64
TUBA1A-208	ENST00000550811	MAP3K14	Q99558	947 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms