RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 PCDHA6Q9UN73 950 aa10.38□□□□□ -0.75
UBE2N-205ENST00000550657 PCDHA8Q9Y5H6 950 aa10.38□□□□□ -0.75
UBE2N-205ENST00000550657 PHLPP1O60346 1717 aa10.38□□□□□ -0.75
UBE2N-205ENST00000550657 POLR3GO15318 223 aaPredicted RBP10.38□□□□□ -0.75
UBE2N-205ENST00000550657 KIF5CO60282 957 aa10.38□□□□□ -0.75
UBE2N-205ENST00000550657 BAG3O95817 575 aa10.38□□□□□ -0.75
UBE2N-205ENST00000550657 COPB1P53618 953 aaKnown RBP10.38□□□□□ -0.75
UBE2N-205ENST00000550657 BMS1Q14692 1282 aaKnown RBP10.38□□□□□ -0.75
UBE2N-205ENST00000550657 KIFC2Q96AC6 838 aa10.38□□□□□ -0.75
UBE2N-205ENST00000550657 PANX2Q96RD6 677 aa10.38□□□□□ -0.75
UBE2N-205ENST00000550657 TMEM47Q9BQJ4 181 aa10.38□□□□□ -0.75
UBE2N-205ENST00000550657 MRFAP1Q9Y605 127 aa10.38□□□□□ -0.75
UBE2N-205ENST00000550657 MYH2Q9UKX2 1941 aa10.38□□□□□ -0.75
UBE2N-205ENST00000550657 CNTNAP4Q9C0A0 1308 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 EFCAB8A8MWE9 144 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 TRAPPC10P48553 1259 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 PMS1P54277 932 aaKnown RBP10.37□□□□□ -0.75
UBE2N-205ENST00000550657 NAPAP54920 295 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 MAP3K9P80192 1104 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 KIF4BQ2VIQ3 1234 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 ZNF658Q5TYW1 1059 aaPredicted RBP10.37□□□□□ -0.75
UBE2N-205ENST00000550657 GPIHBP1Q8IV16 184 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 SLF1Q9BQI6 1058 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 SRRTQ9BXP5 876 aaKnown RBP10.37□□□□□ -0.75
UBE2N-205ENST00000550657 UBA5Q9GZZ9 404 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 DISC1Q9NRI5 854 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 CACNA1SQ13698 1873 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 ERICH4A6NGS2 130 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 KLRF2D3W0D1 207 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 CCNT1O60563 726 aaKnown RBP10.37□□□□□ -0.75
UBE2N-205ENST00000550657 UFL1O94874 794 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 PNMA6AP0CW24 399 aaPredicted RBP10.37□□□□□ -0.75
UBE2N-205ENST00000550657 KRT9P35527 623 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 LONP1P36776 959 aaKnown RBP10.37□□□□□ -0.75
UBE2N-205ENST00000550657 BTDP43251 543 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 EIF6P56537 245 aaKnown RBP10.37□□□□□ -0.75
UBE2N-205ENST00000550657 TCP11X2Q5H9J9 407 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 DGKHQ86XP1 1220 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 C4orf32Q8N8J7 132 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 CNBD1Q8NA66 436 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 WDR66Q8TBY9 1149 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 TRIM47Q96LD4 638 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 RWDD2AQ9UIY3 292 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 FHOD1Q9Y613 1164 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 BCORQ6W2J9 1755 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 CHD4Q14839 1912 aa10.37□□□□□ -0.75
UBE2N-205ENST00000550657 F8W031 263 aaPredicted RBP10.36□□□□□ -0.75
UBE2N-205ENST00000550657 ERVK-24P63145 666 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 GRM4Q14833 912 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 CCDC178Q5BJE1 867 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 UTP14CQ5TAP6 766 aaKnown RBP10.36□□□□□ -0.75
UBE2N-205ENST00000550657 CNGA4Q8IV77 575 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 RMND1Q9NWS8 449 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 TFR2Q9UP52 801 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 PBX1P40424 430 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 PICALMQ13492 652 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 JAKMIP3Q5VZ66 844 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 FAM196AQ6ZSG2 479 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 TEX11Q8IYF3 940 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 SLC35F6Q8N357 371 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 RPGRQ92834 1020 aaKnown RBP10.36□□□□□ -0.75
UBE2N-205ENST00000550657 PCMTD1Q96MG8 357 aaPredicted RBP10.36□□□□□ -0.75
UBE2N-205ENST00000550657 UIMC1Q96RL1 719 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 EYA3Q99504 573 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 FRMPD2Q68DX3 1309 aaPredicted RBP10.36□□□□□ -0.75
UBE2N-205ENST00000550657 STXBP3O00186 592 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 PARP1P09874 1014 aaKnown RBP10.36□□□□□ -0.75
UBE2N-205ENST00000550657 ERCC3P19447 782 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 TECP42680 631 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 GRAPQ13588 217 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 NAALADL2Q58DX5 795 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 TRAPPC3LQ5T215 181 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 ZNF804AQ7Z570 1209 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 GRAPLQ8TC17 118 aaPredicted RBP10.36□□□□□ -0.75
UBE2N-205ENST00000550657 HPS3Q969F9 1004 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 CHP1Q99653 195 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 ABHD10Q9NUJ1 306 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 BIN2Q9UBW5 565 aaPredicted RBP10.36□□□□□ -0.75
UBE2N-205ENST00000550657 TRIM10Q9UDY6 481 aa10.36□□□□□ -0.75
UBE2N-205ENST00000550657 RASA1P20936 1047 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 GNAQP50148 359 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 GPSM2P81274 684 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 ARL6IP4Q66PJ3 421 aaKnown RBP10.35□□□□□ -0.75
UBE2N-205ENST00000550657 CCDC148Q8NFR7 591 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 PARD6BQ9BYG5 372 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 MKRN1Q9UHC7 482 aaKnown RBP10.35□□□□□ -0.75
UBE2N-205ENST00000550657 LTBP4Q8N2S1 1624 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 GOLGB1Q14789 3259 aaKnown RBP10.35□□□□□ -0.75
UBE2N-205ENST00000550657 SMCO2A6NFE2 343 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 PLCG1P19174 1290 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 GSTO1P78417 241 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 CLEC10AQ8IUN9 316 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 LRRC15Q8TF66 581 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 GOLGA1Q92805 767 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 BARHL2Q9NY43 387 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 MAGEC2Q9UBF1 373 aaPredicted RBP10.35□□□□□ -0.75
UBE2N-205ENST00000550657 LIMA1Q9UHB6 759 aaKnown RBP10.35□□□□□ -0.75
UBE2N-205ENST00000550657 GUCA1BQ9UMX6 200 aa10.35□□□□□ -0.75
UBE2N-205ENST00000550657 B4DLN1 442 aa10.34□□□□□ -0.75
UBE2N-205ENST00000550657 RAD21O60216 631 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms