RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 CDHR1Q96JP9 859 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 PXDNLA1KZ92 1463 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 ZBTB24O43167 697 aaPredicted RBP13.6□□□□□ -0.23
NR4A1-215ENST00000550557 STX17P56962 302 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 GOLGA1Q92805 767 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 GPKOWQ92917 476 aaPredicted RBP eCLIP13.6□□□□□ -0.23
NR4A1-215ENST00000550557 NT5C3AQ9H0P0 336 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 MED23Q9ULK4 1368 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 PABPN1LA6NDY0 278 aaKnown RBP13.6□□□□□ -0.23
NR4A1-215ENST00000550557 USP17L10C9JJH3 530 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 URI1O94763 535 aaPredicted RBP13.6□□□□□ -0.23
NR4A1-215ENST00000550557 KRT19P08727 400 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 GBP2P32456 591 aaPredicted RBP13.6□□□□□ -0.23
NR4A1-215ENST00000550557 CDK8P49336 464 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 SYDE2Q5VT97 1194 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 CHAMP1Q96JM3 812 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 ALS2CR12Q96Q35 445 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 PLVAPQ9BX97 442 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 PCDHA12Q9UN75 941 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 PPP1R2P41236 205 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 PAFAH1B1P43034 410 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 ARID5AQ03989 594 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 TAF1CQ15572 869 aaPredicted RBP13.6□□□□□ -0.23
NR4A1-215ENST00000550557 EPHA10Q5JZY3 1008 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 SMAP1Q8IYB5 467 aaPredicted RBP13.6□□□□□ -0.23
NR4A1-215ENST00000550557 PIH1D3Q9NQM4 214 aaKnown RBP13.6□□□□□ -0.23
NR4A1-215ENST00000550557 FBXO40Q9UH90 709 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 LRFN2Q9ULH4 789 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 STRIP1Q5VSL9 837 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 C17orf53Q8N3J3 647 aaPredicted RBP13.59□□□□□ -0.23
NR4A1-215ENST00000550557 LEO1Q8WVC0 666 aaPredicted RBP13.59□□□□□ -0.23
NR4A1-215ENST00000550557 RTEL1Q9NZ71 1219 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
NR4A1-215ENST00000550557 STX10O60499 249 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 MCM3P25205 808 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 UBXN2AP68543 259 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 CNNM4Q6P4Q7 775 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 FASTKD5Q7L8L6 764 aaKnown RBP13.59□□□□□ -0.23
NR4A1-215ENST00000550557 SH3RF3Q8TEJ3 882 aaPredicted RBP13.59□□□□□ -0.23
NR4A1-215ENST00000550557 MST1RQ04912 1400 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 TMED8Q6PL24 325 aaPredicted RBP13.59□□□□□ -0.23
NR4A1-215ENST00000550557 RAET1EQ8TD07 263 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 MYO5BQ9ULV0 1848 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 CASQ1P31415 396 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 ADD1P35611 737 aaKnown RBP13.59□□□□□ -0.23
NR4A1-215ENST00000550557 LMAN1P49257 510 aa13.59□□□□□ -0.23
NR4A1-215ENST00000550557 GMPSP49915 693 aaPredicted RBP13.59□□□□□ -0.23
NR4A1-215ENST00000550557 SMC1AQ14683 1233 aaKnown RBP13.59□□□□□ -0.23
NR4A1-215ENST00000550557 IFI16Q16666 785 aaKnown RBP13.59□□□□□ -0.23
NR4A1-215ENST00000550557 CETN3O15182 167 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 JAK2O60674 1132 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 POLGP54098 1239 aaPredicted RBP13.58□□□□□ -0.24
NR4A1-215ENST00000550557 TGFB2P61812 414 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 ZRSR2Q15696 482 aaKnown RBP13.58□□□□□ -0.24
NR4A1-215ENST00000550557 GALNT17Q6IS24 598 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.58□□□□□ -0.24
NR4A1-215ENST00000550557 NEK8Q86SG6 692 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 CABP7Q86V35 215 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 SLFN12Q8IYM2 578 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 JPH2Q9BR39 696 aaPredicted RBP13.58□□□□□ -0.24
NR4A1-215ENST00000550557 GGA3Q9NZ52 723 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.58□□□□□ -0.24
NR4A1-215ENST00000550557 CPDO75976 1380 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 TNPO2O14787 897 aaKnown RBP13.58□□□□□ -0.24
NR4A1-215ENST00000550557 INF2Q27J81 1249 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 CYP2D7A0A087X1C5 515 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 EXOC3O60645 756 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 SF3B3Q15393 1217 aaKnown RBP13.58□□□□□ -0.24
NR4A1-215ENST00000550557 DYMQ7RTS9 669 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 AOPEPQ8N6M6 819 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 RNF34Q969K3 372 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 IWS1Q96ST2 819 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 CENPHQ9H3R5 247 aa13.58□□□□□ -0.24
NR4A1-215ENST00000550557 FAM196BA6NMK8 535 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 DTNBO60941 627 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 MCAMP43121 646 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 YARSP54577 528 aaKnown RBP13.57□□□□□ -0.24
NR4A1-215ENST00000550557 UBASH3AP57075 661 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 RASA3Q14644 834 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 ANGEL2Q5VTE6 544 aaKnown RBP13.57□□□□□ -0.24
NR4A1-215ENST00000550557 NEK11Q8NG66 645 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 ATP6V0A1Q93050 837 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 CLSTN2Q9H4D0 955 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 CALUO43852 315 aaPredicted RBP13.57□□□□□ -0.24
NR4A1-215ENST00000550557 EEF2P13639 858 aaKnown RBP13.57□□□□□ -0.24
NR4A1-215ENST00000550557 KRT5P13647 590 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 MAP9Q49MG5 647 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 ZNF274Q96GC6 653 aaPredicted RBP13.57□□□□□ -0.24
NR4A1-215ENST00000550557 PUS7LQ9H0K6 701 aaKnown RBP13.57□□□□□ -0.24
NR4A1-215ENST00000550557 MRPL44Q9H9J2 332 aaKnown RBP13.57□□□□□ -0.24
NR4A1-215ENST00000550557 ZNF215Q9UL58 517 aaPredicted RBP13.57□□□□□ -0.24
NR4A1-215ENST00000550557 CELF2O95319 508 aaKnown RBP13.57□□□□□ -0.24
NR4A1-215ENST00000550557 GCNT3O95395 438 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 FAM160A1Q05DH4 1040 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 CLEC17AQ6ZS10 378 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 ZNF34Q8IZ26 560 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 KRT222Q8N1A0 295 aa13.57□□□□□ -0.24
NR4A1-215ENST00000550557 TAX1BP1Q86VP1 789 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms