RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 GOLGA4Q13439 2230 aaKnown RBP13.75□□□□□ -0.21
RAB3IP-212ENST00000550536 BSPRYQ5W0U4 402 aa13.75□□□□□ -0.21
RAB3IP-212ENST00000550536 RSPH3Q86UC2 560 aa13.75□□□□□ -0.21
RAB3IP-212ENST00000550536 GBP7Q8N8V2 638 aaPredicted RBP13.75□□□□□ -0.21
RAB3IP-212ENST00000550536 SLF1Q9BQI6 1058 aa13.75□□□□□ -0.21
RAB3IP-212ENST00000550536 TYW1Q9NV66 732 aaKnown RBP13.75□□□□□ -0.21
RAB3IP-212ENST00000550536 TESPA1A2RU30 521 aaPredicted RBP13.75□□□□□ -0.21
RAB3IP-212ENST00000550536 ATP5JP18859 108 aa13.75□□□□□ -0.21
RAB3IP-212ENST00000550536 ZNF654Q8IZM8 581 aa13.75□□□□□ -0.21
RAB3IP-212ENST00000550536 ST7Q9NRC1 585 aa13.75□□□□□ -0.21
RAB3IP-212ENST00000550536 TFAP4Q01664 338 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 RIC8AQ9NPQ8 531 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 RAB20Q9NX57 234 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 FAM135BQ49AJ0 1406 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 LIG4P49917 911 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 FAM98CQ17RN3 349 aaKnown RBP13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 KRT71Q3SY84 523 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 KRT26Q7Z3Y9 468 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 NELFCDQ8IXH7 590 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 PALM2Q8IXS6 379 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 hCG_1642624A0A1W2PR95 340 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 PPIP5K2O43314 1243 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 MAGEA1P43355 309 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 MYRIPQ8NFW9 859 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 PPP1R12CQ9BZL4 782 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 H7C1D1 291 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 K7ENM7 598 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 ZBTB8OSQ8IWT0 167 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 NDUFB9Q9Y6M9 179 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 HMGB1P1B2RPK0 211 aaPredicted RBP13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 CHL1O00533 1208 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 CAPN9O14815 690 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 MGARPQ8TDB4 240 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 CARD6Q9BX69 1037 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 ZAP70P43403 619 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 ATP8A2Q9NTI2 1148 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 PCDHA12Q9UN75 941 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 PFDN6O15212 129 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 ANKRD20A3Q5VUR7 823 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 KRIT1O00522 736 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 TNNC2P02585 160 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 MYOCDQ8IZQ8 938 aa13.74□□□□□ -0.21
RAB3IP-212ENST00000550536 FRMPD2Q68DX3 1309 aaPredicted RBP13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 OATP04181 439 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 MAN1A1P33908 653 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 CTNNA1P35221 906 aaKnown RBP13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 ADALQ6DHV7 355 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 SLC17A8Q8NDX2 589 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 IPO11Q9UI26 975 aaKnown RBP13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 PNMA2Q9UL42 364 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 HGSO14964 777 aaPredicted RBP13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 PRR16Q569H4 304 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 MCF2L2Q86YR7 1114 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 BLIDQ8IZY5 108 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 PIK3CAP42336 1068 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 PDZD4Q76G19 769 aaPredicted RBP13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 ZNF274Q96GC6 653 aaPredicted RBP13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 FAM114A2Q9NRY5 505 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 RINT1Q6NUQ1 792 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 ANO3Q9BYT9 981 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 EFCAB6Q5THR3 1501 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 CEP170Q5SW79 1584 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 ZNF853P0CG23 659 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 TROVE2P10155 538 aaKnown RBP eCLIP13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 DCAF15Q66K64 600 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 HVCN1Q96D96 273 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 SEPT10Q9P0V9 454 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 U2AF2P26368 475 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■□□□ 12.9
RAB3IP-212ENST00000550536 TECP42680 631 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 ADCY10Q96PN6 1610 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
RAB3IP-212ENST00000550536 JAK2O60674 1132 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 LRMPQ12912 555 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 KIAA1468Q9P260 1216 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 STX2P32856 288 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 ADKP55263 362 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 THAP12O43422 761 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 CCDC13Q8IYE1 715 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 MMS19Q96T76 1030 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 MRPL11Q9Y3B7 192 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 GADD45BO75293 160 aaPredicted RBP13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 POLR2MP0CAP2 368 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 ABCB4P21439 1286 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 FAM178BQ8IXR5 827 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 CABS1Q96KC9 395 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 PCP11498 1178 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 U2AF1L4Q8WU68 220 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 NCAPGQ9BPX3 1015 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 ADPGKQ9BRR6 497 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 VCX3AQ9NNX9 186 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 POLGP54098 1239 aaPredicted RBP13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 ME3Q16798 604 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 EAPPQ56P03 285 aaPredicted RBP13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 TRMT44Q8IYL2 757 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 LGR6Q9HBX8 967 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 A1BGP04217 495 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 ADCY8P40145 1251 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 MAGEF1Q9HAY2 307 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms