RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 MKL1Q969V6 931 aa22.59■■□□□ 1.21
LETMD1-224ENST00000550446 FSD1Q9BTV5 496 aa22.59■■□□□ 1.21
LETMD1-224ENST00000550446 MTMR4Q9NYA4 1195 aa22.59■■□□□ 1.21
LETMD1-224ENST00000550446 ROBO3Q96MS0 1386 aa22.59■■□□□ 1.21
LETMD1-224ENST00000550446 ZNF865P0CJ78 1059 aaPredicted RBP22.58■■□□□ 1.21
LETMD1-224ENST00000550446 SNX17Q15036 470 aa22.58■■□□□ 1.21
LETMD1-224ENST00000550446 SH3RF1Q7Z6J0 888 aa22.58■■□□□ 1.21
LETMD1-224ENST00000550446 LRRC47Q8N1G4 583 aaKnown RBP22.58■■□□□ 1.21
LETMD1-224ENST00000550446 PI4K2BQ8TCG2 481 aa22.58■■□□□ 1.21
LETMD1-224ENST00000550446 BADQ92934 168 aa22.58■■□□□ 1.21
LETMD1-224ENST00000550446 RAVER2Q9HCJ3 691 aaKnown RBP22.58■■□□□ 1.21
LETMD1-224ENST00000550446 PHF24Q9UPV7 400 aa22.58■■□□□ 1.21
LETMD1-224ENST00000550446 FRMPD3Q5JV73 1810 aa22.57■■□□□ 1.2
LETMD1-224ENST00000550446 TTLL1O95922 423 aa22.57■■□□□ 1.2
LETMD1-224ENST00000550446 TSPY3P0CV98 308 aa22.57■■□□□ 1.2
LETMD1-224ENST00000550446 TSPY8P0CW00 308 aa22.57■■□□□ 1.2
LETMD1-224ENST00000550446 AKR1A1P14550 325 aa22.57■■□□□ 1.2
LETMD1-224ENST00000550446 TLE2Q04725 743 aa22.57■■□□□ 1.2
LETMD1-224ENST00000550446 PDE4BQ07343 736 aa22.57■■□□□ 1.2
LETMD1-224ENST00000550446 LENG1Q96BZ8 264 aaPredicted RBP22.57■■□□□ 1.2
LETMD1-224ENST00000550446 CHMP4CQ96CF2 233 aa22.57■■□□□ 1.2
LETMD1-224ENST00000550446 FEM1BQ9UK73 627 aa22.57■■□□□ 1.2
LETMD1-224ENST00000550446 ISY1Q9ULR0 285 aaKnown RBP22.57■■□□□ 1.2
LETMD1-224ENST00000550446 MYH7P12883 1935 aa22.57■■□□□ 1.2
LETMD1-224ENST00000550446 TRIM43BA6NCK2 446 aa22.56■■□□□ 1.2
LETMD1-224ENST00000550446 SLC3A2P08195 630 aaKnown RBP22.56■■□□□ 1.2
LETMD1-224ENST00000550446 TFAP4Q01664 338 aa22.56■■□□□ 1.2
LETMD1-224ENST00000550446 SHHQ15465 462 aa22.56■■□□□ 1.2
LETMD1-224ENST00000550446 SLFN13Q68D06 897 aa22.56■■□□□ 1.2
LETMD1-224ENST00000550446 NEDD1Q8NHV4 660 aa22.56■■□□□ 1.2
LETMD1-224ENST00000550446 TRIM43Q96BQ3 446 aaPredicted RBP22.56■■□□□ 1.2
LETMD1-224ENST00000550446 NAPBQ9H115 298 aa22.56■■□□□ 1.2
LETMD1-224ENST00000550446 SLC38A10Q9HBR0 1119 aa22.56■■□□□ 1.2
LETMD1-224ENST00000550446 PDLIM7Q9NR12 457 aa22.56■■□□□ 1.2
LETMD1-224ENST00000550446 STXBP5LQ9Y2K9 1186 aa22.56■■□□□ 1.2
LETMD1-224ENST00000550446 POTEB2H3BUK9 544 aa22.55■■□□□ 1.2
LETMD1-224ENST00000550446 DLL1O00548 723 aa22.55■■□□□ 1.2
LETMD1-224ENST00000550446 ATP2A1O14983 1001 aa22.55■■□□□ 1.2
LETMD1-224ENST00000550446 SNAI1O95863 264 aaPredicted RBP22.55■■□□□ 1.2
LETMD1-224ENST00000550446 ZMYM1Q5SVZ6 1142 aa22.55■■□□□ 1.2
LETMD1-224ENST00000550446 C1orf53Q5VUE5 145 aa22.55■■□□□ 1.2
LETMD1-224ENST00000550446 ANKRD35Q8N283 1001 aa22.55■■□□□ 1.2
LETMD1-224ENST00000550446 MSL3Q8N5Y2 521 aaKnown RBP22.55■■□□□ 1.2
LETMD1-224ENST00000550446 ZHX1Q9UKY1 873 aaPredicted RBP22.55■■□□□ 1.2
LETMD1-224ENST00000550446 FAM184BQ9ULE4 1060 aa22.55■■□□□ 1.2
LETMD1-224ENST00000550446 DNAJC25-GNG10A0A024R161 153 aa22.54■■□□□ 1.2
LETMD1-224ENST00000550446 BMP3P12645 472 aa22.54■■□□□ 1.2
LETMD1-224ENST00000550446 PPARAQ07869 468 aa22.54■■□□□ 1.2
LETMD1-224ENST00000550446 GMCL1P1Q8NEA9 526 aa22.54■■□□□ 1.2
LETMD1-224ENST00000550446 FAM161BQ96MY7 647 aa22.54■■□□□ 1.2
LETMD1-224ENST00000550446 ZNFX1Q9P2E3 1918 aaKnown RBP22.54■■□□□ 1.2
LETMD1-224ENST00000550446 COL11A1P12107 1806 aaPredicted RBP22.53■■□□□ 1.2
LETMD1-224ENST00000550446 A0A1W2PQ45 241 aaPredicted RBP22.53■■□□□ 1.2
LETMD1-224ENST00000550446 A0A1W2PQY0 241 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 TMEM232C9JQI7 657 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 MX1P20591 662 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 C9orf50Q5SZB4 431 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 MAMDC4Q6UXC1 1216 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 INCENPQ9NQS7 918 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 HOMER2Q9NSB8 354 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 ZBTB47Q9UFB7 747 aaPredicted RBP22.53■■□□□ 1.2
LETMD1-224ENST00000550446 SYNPO2Q9UMS6 1093 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 TACC3Q9Y6A5 838 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 SMCHD1A6NHR9 2005 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 SYNGAP1Q96PV0 1343 aa22.53■■□□□ 1.2
LETMD1-224ENST00000550446 PQBP1O60828 265 aaKnown RBP22.52■■□□□ 1.2
LETMD1-224ENST00000550446 CCDC129Q6ZRS4 1044 aa22.52■■□□□ 1.2
LETMD1-224ENST00000550446 FBXO40Q9UH90 709 aa22.52■■□□□ 1.2
LETMD1-224ENST00000550446 PARP14Q460N5 1801 aa22.52■■□□□ 1.2
LETMD1-224ENST00000550446 ADAMTS4O75173 837 aa22.51■■□□□ 1.19
LETMD1-224ENST00000550446 CLTBP09497 229 aa22.51■■□□□ 1.19
LETMD1-224ENST00000550446 MCCP23508 829 aa22.51■■□□□ 1.19
LETMD1-224ENST00000550446 ACLYP53396 1101 aa22.51■■□□□ 1.19
LETMD1-224ENST00000550446 OAZ1P54368 228 aa22.51■■□□□ 1.19
LETMD1-224ENST00000550446 IKQ13123 557 aaPredicted RBP22.51■■□□□ 1.19
LETMD1-224ENST00000550446 ACVR2BQ13705 512 aa22.51■■□□□ 1.19
LETMD1-224ENST00000550446 KCNA10Q16322 511 aa22.51■■□□□ 1.19
LETMD1-224ENST00000550446 ANKRD45Q5TZF3 282 aa22.51■■□□□ 1.19
LETMD1-224ENST00000550446 FAM109BQ6ICB4 259 aaPredicted RBP22.51■■□□□ 1.19
LETMD1-224ENST00000550446 ZNF467Q7Z7K2 595 aaPredicted RBP22.51■■□□□ 1.19
LETMD1-224ENST00000550446 CHST13Q8NET6 341 aa22.51■■□□□ 1.19
LETMD1-224ENST00000550446 TSEN34Q9BSV6 310 aaKnown RBP22.51■■□□□ 1.19
LETMD1-224ENST00000550446 ITGB8P26012 769 aa22.5■■□□□ 1.19
LETMD1-224ENST00000550446 CTDSPL2Q05D32 466 aa22.5■■□□□ 1.19
LETMD1-224ENST00000550446 CHURC1Q8WUH1 139 aa22.5■■□□□ 1.19
LETMD1-224ENST00000550446 STARD7Q9NQZ5 370 aa22.5■■□□□ 1.19
LETMD1-224ENST00000550446 TMEM39AQ9NV64 488 aa22.5■■□□□ 1.19
LETMD1-224ENST00000550446 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.5■■□□□ 1.19
LETMD1-224ENST00000550446 SYNRGQ9UMZ2 1314 aa22.5■■□□□ 1.19
LETMD1-224ENST00000550446 DUSP11O75319 330 aaKnown RBP22.49■■□□□ 1.19
LETMD1-224ENST00000550446 RAG1P15918 1043 aa22.49■■□□□ 1.19
LETMD1-224ENST00000550446 SLC1A4P43007 532 aa22.49■■□□□ 1.19
LETMD1-224ENST00000550446 STAT2P52630 851 aa22.49■■□□□ 1.19
LETMD1-224ENST00000550446 KLHDC9Q8NEP7 349 aa22.49■■□□□ 1.19
LETMD1-224ENST00000550446 NUP133Q8WUM0 1156 aa22.49■■□□□ 1.19
LETMD1-224ENST00000550446 STAG1Q8WVM7 1258 aa22.49■■□□□ 1.19
LETMD1-224ENST00000550446 AGBL1Q96MI9 1066 aa22.49■■□□□ 1.19
LETMD1-224ENST00000550446 STX8Q9UNK0 236 aa22.49■■□□□ 1.19
LETMD1-224ENST00000550446 GREB1LQ9C091 1923 aaPredicted RBP22.49■■□□□ 1.19
LETMD1-224ENST00000550446 TSPY2A6NKD2 308 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms