RNA–Protein interactions for RNA: ENST00000550367.1

TUBA1B-206, Transcript of tubulin alpha 1b, humanhuman

TSL 3

Gene TUBA1B, Length 835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-206ENST00000550367 CDK7P50613 346 aa11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 FAM83BQ5T0W9 1011 aa11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 VTI1AQ96AJ9 217 aa11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 DNAJC2Q99543 621 aaKnown RBP11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 NUP88Q99567 741 aaPredicted RBP11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 NKX2-4Q9H2Z4 354 aa11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 DIS3Q9Y2L1 958 aaKnown RBP11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 YBX2Q9Y2T7 364 aaKnown RBP11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 CHD7Q9P2D1 2997 aa11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 REV3LO60673 3130 aa11.59□□□□□ -0.55
TUBA1B-206ENST00000550367 ROBO3Q96MS0 1386 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 TCF20Q9UGU0 1960 aaKnown RBP11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 APBB1O00213 710 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 GOLIM4O00461 696 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 ASGR1P07306 291 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 C6orf222P0C671 652 aaPredicted RBP11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 CYP2C18P33260 490 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 PLA2G5P39877 138 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 CDK8P49336 464 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 MRPS5P82675 430 aaKnown RBP11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 PPIGQ13427 754 aaKnown RBP eCLIP11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 AKNAD1Q5T1N1 836 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 NUP133Q8WUM0 1156 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 FAM184BQ9ULE4 1060 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 PPP1R9AQ9ULJ8 1098 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 UMODL1Q5DID0 1318 aa11.58□□□□□ -0.56
TUBA1B-206ENST00000550367 MOXD2PA6NHM9 499 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 MBD4O95243 580 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 RLBP1P12271 317 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 MYOGP15173 224 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 PTGS1P23219 599 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 TFF2Q03403 129 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 ZKSCAN2Q63HK3 967 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 MICALL1Q8N3F8 863 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 GLT1D1Q96MS3 346 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 SH2D4AQ9H788 454 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 SWAP70Q9UH65 585 aa11.57□□□□□ -0.56
TUBA1B-206ENST00000550367 MYH8P13535 1937 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 BAZ2AQ9UIF9 1905 aaKnown RBP11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 DNAJC25-GNG10A0A024R161 153 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 USP17L12C9JPN9 530 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 USP17L21D6R901 530 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 ARVCFO00192 962 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 CTAGE5O15320 804 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 DUSP11O75319 330 aaKnown RBP11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 RABGGTBP53611 331 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 BEX3Q00994 111 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 ACVR2BQ13705 512 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 CCDC144BQ3MJ40 725 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 C12orf60Q5U649 245 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 SNRNP48Q6IEG0 339 aaKnown RBP11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 CEP85Q6P2H3 762 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 OTOP2Q7RTS6 562 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 FAM126BQ8IXS8 530 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 CPXCR1Q8N123 301 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 STK11IPQ8N1F8 1099 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 TMEM199Q8N511 208 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 GBF1Q92538 1859 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 FAM122AQ96E09 287 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 DDX11Q96FC9 970 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 FGD4Q96M96 766 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 MSRAQ9UJ68 235 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 ELP1O95163 1332 aa11.56□□□□□ -0.56
TUBA1B-206ENST00000550367 RFXAPO00287 272 aa11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 KCNQ1P51787 676 aa11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 TTF1Q15361 905 aaPredicted RBP11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 GNASQ5JWF2 1037 aa11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 PSRC1Q6PGN9 363 aaPredicted RBP11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 MAMDC4Q6UXC1 1216 aa11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 C16orf86Q6ZW13 317 aa11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 ITPRIPQ8IWB1 547 aa11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 CCDC17Q96LX7 622 aa11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 SLC28A3Q9HAS3 691 aa11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 IL23AQ9NPF7 189 aa11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 DDX49Q9Y6V7 483 aaKnown RBP11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 SYNGAP1Q96PV0 1343 aa11.55□□□□□ -0.56
TUBA1B-206ENST00000550367 MCM3APO60318 1980 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 A0A0U1RQG5 324 aaPredicted RBP11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 FGBP02675 491 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 BMP1P13497 986 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 CST5P28325 142 aaPredicted RBP11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 CCL23P55773 120 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 GJA9P57773 515 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 RAB30Q15771 203 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 TMED8Q6PL24 325 aaPredicted RBP11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 CXCL17Q6UXB2 119 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 PCSK9Q8NBP7 692 aaKnown RBP11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 IL27Q8NEV9 243 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 HERVK_113Q902F9 699 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 SLF1Q9BQI6 1058 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 TEX13BQ9BXU2 312 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 UPF3AQ9H1J1 476 aaKnown RBP11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 EPHX3Q9H6B9 360 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 RAVER2Q9HCJ3 691 aaKnown RBP11.54□□□□□ -0.56
TUBA1B-206ENST00000550367 GOPCQ9HD26 462 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms