RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 KIF3AQ9Y496 699 aa9.43□□□□□ -0.9
GPN3-207ENST00000550228 A0A0G2JLL6 359 aaPredicted RBP9.42□□□□□ -0.9
GPN3-207ENST00000550228 VPS37CA5D8V6 355 aaPredicted RBP9.42□□□□□ -0.9
GPN3-207ENST00000550228 UNCXA6NJT0 531 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 TMEM88BA6NKF7 163 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 CXCL11O14625 94 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 FLOT1O75955 427 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 ZNF157P51786 506 aaPredicted RBP9.42□□□□□ -0.9
GPN3-207ENST00000550228 STAT2P52630 851 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 GUCY1B3Q02153 619 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 FSTL1Q12841 308 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 SNAPC2Q13487 334 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 CDC37Q16543 378 aaPredicted RBP9.42□□□□□ -0.9
GPN3-207ENST00000550228 SH3D19Q5HYK7 790 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 TREML2Q5T2D2 321 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 LARP1BQ659C4 914 aaKnown RBP9.42□□□□□ -0.9
GPN3-207ENST00000550228 OTUD7BQ6GQQ9 843 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 PAXIP1Q6ZW49 1069 aaPredicted RBP9.42□□□□□ -0.9
GPN3-207ENST00000550228 PRRT2Q7Z6L0 340 aaPredicted RBP9.42□□□□□ -0.9
GPN3-207ENST00000550228 FAM160B2Q86V87 743 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 RASAL3Q86YV0 1011 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 CHURC1Q8WUH1 139 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 WASF1Q92558 559 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
GPN3-207ENST00000550228 KIFC2Q96AC6 838 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 C8orf76Q96K31 380 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 SLF1Q9BQI6 1058 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 RIOX1Q9H6W3 641 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 JMJD4Q9H9V9 463 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
GPN3-207ENST00000550228 FEM1BQ9UK73 627 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 PRR12Q9ULL5 1215 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 TLL2Q9Y6L7 1015 aa9.42□□□□□ -0.9
GPN3-207ENST00000550228 COL11A1P12107 1806 aaPredicted RBP9.41□□□□□ -0.9
GPN3-207ENST00000550228 H3BQV1 296 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 SCG2P13521 617 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 SMARCA1P28370 1054 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 GRM1Q13255 1194 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 PKP1Q13835 747 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 PKN1Q16512 942 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 QRICH1Q2TAL8 776 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 IFFO2Q5TF58 517 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 SPRYD7Q5W111 196 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 RGMBQ6NW40 437 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 CCDC174Q6PII3 467 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 BTNL9Q6UXG8 535 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 HEATR3Q7Z4Q2 680 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 SAPCD2Q86UD0 394 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 GJB4Q9NTQ9 266 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 VPS54Q9P1Q0 977 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
GPN3-207ENST00000550228 CTDP1Q9Y5B0 961 aaPredicted RBP9.41□□□□□ -0.9
GPN3-207ENST00000550228 RLFQ13129 1914 aa9.41□□□□□ -0.9
GPN3-207ENST00000550228 CCL15-CCL14A0A0B4J2E2 113 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 PNMA6FA0A0J9YX94 578 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 USP17L15C9J2P7 530 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 USP17L13C9JLJ4 530 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 USP17L11C9JVI0 530 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 USP17L18D6R9N7 530 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 USP17L22D6RA61 530 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 USP17L17D6RBQ6 530 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 USP17L19D6RCP7 530 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 USP17L20D6RJB6 530 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 ZBTB5O15062 677 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 STX6O43752 255 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 CETPP11597 493 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 TAL1P17542 331 aaPredicted RBP9.4□□□□□ -0.9
GPN3-207ENST00000550228 PDCP20941 246 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 SYT1P21579 422 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 DDIT3P35638 169 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 GTF2A2P52657 109 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 USP17L24Q0WX57 530 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 TRIM29Q14134 588 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 CCL15Q16663 113 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 PFKFB3Q16875 520 aaPredicted RBP9.4□□□□□ -0.9
GPN3-207ENST00000550228 KRT40Q6A162 431 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 WWC2Q6AWC2 1192 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 FASTKD5Q7L8L6 764 aaKnown RBP9.4□□□□□ -0.9
GPN3-207ENST00000550228 PROCA1Q8NCQ7 364 aaPredicted RBP9.4□□□□□ -0.9
GPN3-207ENST00000550228 ATG4CQ96DT6 458 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 CHMP5Q9NZZ3 219 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 PPP1R9AQ9ULJ8 1098 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 KCNJ14Q9UNX9 436 aa9.4□□□□□ -0.9
GPN3-207ENST00000550228 PLA2G6O60733 806 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 PPP1R11O60927 126 aaPredicted RBP9.39□□□□□ -0.91
GPN3-207ENST00000550228 SLC10A3P09131 477 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 ZBTB48P10074 688 aaPredicted RBP9.39□□□□□ -0.91
GPN3-207ENST00000550228 XBP1P17861 261 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 NAPAP54920 295 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 IRX3P78415 501 aaPredicted RBP9.39□□□□□ -0.91
GPN3-207ENST00000550228 MOGSQ13724 837 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 USH1GQ495M9 461 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 MCTP1Q6DN14 999 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 CATSPERGQ6ZRH7 1159 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 FERMT3Q86UX7 667 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 PRPF38AQ8NAV1 312 aaKnown RBP9.39□□□□□ -0.91
GPN3-207ENST00000550228 BRI3BPQ8WY22 251 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 COA7Q96BR5 231 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 SHISA4Q96DD7 197 aa9.39□□□□□ -0.91
GPN3-207ENST00000550228 MTMR8Q96EF0 704 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms