RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 AMOTQ4VCS5 1084 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 MEI1Q5TIA1 1274 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 PCNX4Q63HM2 1172 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 PRR23CQ6ZRP0 262 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 ARMC10Q8N2F6 343 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 STK35Q8TDR2 534 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 PNISRQ8TF01 805 aaKnown RBP8.44□□□□□ -1.06
UBE2N-204ENST00000549833 ACSBG1Q96GR2 724 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 WDR18Q9BV38 432 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 AP4E1Q9UPM8 1137 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 SYNGAP1Q96PV0 1343 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 PLEKHG2Q9H7P9 1386 aa8.44□□□□□ -1.06
UBE2N-204ENST00000549833 RGPD3A6NKT7 1758 aaPredicted RBP8.43□□□□□ -1.06
UBE2N-204ENST00000549833 RGPD4Q7Z3J3 1758 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 CCER2I3L3R5 266 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 K7ELQ4 463 aaPredicted RBP8.43□□□□□ -1.06
UBE2N-204ENST00000549833 PAGE1O75459 146 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 CTSHP09668 335 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 SOX4Q06945 474 aaPredicted RBP8.43□□□□□ -1.06
UBE2N-204ENST00000549833 ZNF252P-AS1Q0IIN9 211 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 C1orf141Q5JVX7 400 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 MAP1SQ66K74 1059 aaPredicted RBP8.43□□□□□ -1.06
UBE2N-204ENST00000549833 LLGL2Q6P1M3 1020 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 FAM196AQ6ZSG2 479 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 PTF1AQ7RTS3 328 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 IFNL2Q8IZJ0 200 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 FAM9BQ8IZU0 186 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 YIPF2Q9BWQ6 316 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 KDM6AO15550 1401 aaPredicted RBP8.43□□□□□ -1.06
UBE2N-204ENST00000549833 PAPPAQ13219 1627 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 KDM3BQ7LBC6 1761 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 UBR2Q8IWV8 1755 aa8.43□□□□□ -1.06
UBE2N-204ENST00000549833 TRIM37O94972 964 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 SLFN14P0C7P3 912 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 LIG1P18858 919 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 BMP6P22004 513 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 KIF4BQ2VIQ3 1234 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 IGSF5Q9NSI5 407 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 RAXQ9Y2V3 346 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 MAPK8IP3Q9UPT6 1336 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 MAP3K5Q99683 1374 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 BCL9O00512 1426 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 RREB1Q92766 1687 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 TUBGCP6Q96RT7 1819 aa8.42□□□□□ -1.06
UBE2N-204ENST00000549833 MYH14Q7Z406 1995 aaKnown RBP8.42□□□□□ -1.06
UBE2N-204ENST00000549833 NUP188Q5SRE5 1749 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 KCNQ2O43526 872 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 IGSF3O75054 1194 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 NEFMP07197 916 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 BMP3P12645 472 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 LMNB1P20700 586 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 USP11P51784 963 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 MRPL58Q14197 206 aaKnown RBP8.41□□□□□ -1.06
UBE2N-204ENST00000549833 SCARA3Q6AZY7 606 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 TTBK2Q6IQ55 1244 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 FAM20CQ8IXL6 584 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 C2CD4AQ8NCU7 369 aaPredicted RBP8.41□□□□□ -1.06
UBE2N-204ENST00000549833 RUNDC1Q96C34 613 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 NOC4LQ9BVI4 516 aaKnown RBP8.41□□□□□ -1.06
UBE2N-204ENST00000549833 PNNQ9H307 717 aaKnown RBP8.41□□□□□ -1.06
UBE2N-204ENST00000549833 KCNF1Q9H3M0 494 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 CYP8B1Q9UNU6 501 aa8.41□□□□□ -1.06
UBE2N-204ENST00000549833 RRP7AQ9Y3A4 280 aaKnown RBP8.41□□□□□ -1.06
UBE2N-204ENST00000549833 MRC1P22897 1456 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 GNAT3A8MTJ3 354 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 ZNF862O60290 1169 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 RLBP1P12271 317 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 DRD2P14416 443 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 RPS26P62854 115 aaKnown RBP8.4□□□□□ -1.06
UBE2N-204ENST00000549833 ID3Q02535 119 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 NFE2L2Q16236 605 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 SYTL4Q96C24 671 aaPredicted RBP8.4□□□□□ -1.06
UBE2N-204ENST00000549833 SEMA6BQ9H3T3 888 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 LGR6Q9HBX8 967 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 ACTL7BQ9Y614 415 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 CACNA1FO60840 1977 aa8.4□□□□□ -1.06
UBE2N-204ENST00000549833 C5P01031 1676 aa8.4□□□□□ -1.07
UBE2N-204ENST00000549833 APAF1O14727 1248 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 TMPRSS2O15393 492 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 RNMTO43148 476 aaKnown RBP8.39□□□□□ -1.07
UBE2N-204ENST00000549833 HSP90AB1P08238 724 aaKnown RBP8.39□□□□□ -1.07
UBE2N-204ENST00000549833 TMPOP42166 694 aaKnown RBP8.39□□□□□ -1.07
UBE2N-204ENST00000549833 LIG3P49916 1009 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 DCTN1Q14203 1278 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 SGO2Q562F6 1265 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 MCM10Q7L590 875 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 DYMQ7RTS9 669 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 IL17REQ8NFR9 667 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 GPBAR1Q8TDU6 330 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 WDR89Q96FK6 387 aaPredicted RBP8.39□□□□□ -1.07
UBE2N-204ENST00000549833 ATXN3LQ9H3M9 355 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 STOML1Q9UBI4 398 aa8.39□□□□□ -1.07
UBE2N-204ENST00000549833 COL5A3P25940 1745 aaPredicted RBP8.39□□□□□ -1.07
UBE2N-204ENST00000549833 TJP1Q07157 1748 aa8.38□□□□□ -1.07
UBE2N-204ENST00000549833 GSC2O15499 205 aa8.38□□□□□ -1.07
UBE2N-204ENST00000549833 ADAM23O75077 832 aa8.38□□□□□ -1.07
UBE2N-204ENST00000549833 MAP4P27816 1152 aaKnown RBP8.38□□□□□ -1.07
UBE2N-204ENST00000549833 RIPK4P57078 832 aa8.38□□□□□ -1.07
UBE2N-204ENST00000549833 MAP3K11Q16584 847 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms