RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 BECN2A8MW95 431 aa21.84■■□□□ 1.09
BRF1-215ENST00000549655 ATRNL1Q5VV63 1379 aa21.84■■□□□ 1.09
BRF1-215ENST00000549655 SMCO2A6NFE2 343 aa21.83■■□□□ 1.09
BRF1-215ENST00000549655 SPDYE2BA6NHP3 402 aa21.83■■□□□ 1.09
BRF1-215ENST00000549655 SPDYE6P0CI01 402 aa21.83■■□□□ 1.09
BRF1-215ENST00000549655 SHROOM1Q2M3G4 852 aaPredicted RBP21.83■■□□□ 1.09
BRF1-215ENST00000549655 NIM1KQ8IY84 436 aa21.83■■□□□ 1.09
BRF1-215ENST00000549655 PDILTQ8N807 584 aa21.83■■□□□ 1.09
BRF1-215ENST00000549655 EPSTI1Q96J88 318 aa21.83■■□□□ 1.09
BRF1-215ENST00000549655 SERTAD1Q9UHV2 236 aa21.83■■□□□ 1.09
BRF1-215ENST00000549655 HOOK1Q9UJC3 728 aaKnown RBP21.83■■□□□ 1.09
BRF1-215ENST00000549655 HDAC9Q9UKV0 1011 aa21.83■■□□□ 1.09
BRF1-215ENST00000549655 ZBTB12Q9Y330 459 aaPredicted RBP21.83■■□□□ 1.09
BRF1-215ENST00000549655 VWA3AA6NCI4 1184 aa21.83■■□□□ 1.08
BRF1-215ENST00000549655 POLD1P28340 1107 aa21.83■■□□□ 1.08
BRF1-215ENST00000549655 MDM2Q00987 491 aaPredicted RBP21.83■■□□□ 1.08
BRF1-215ENST00000549655 OGFOD1Q8N543 542 aa21.83■■□□□ 1.08
BRF1-215ENST00000549655 KANSL2Q9H9L4 492 aa21.83■■□□□ 1.08
BRF1-215ENST00000549655 C6orf50Q9HD87 102 aa21.83■■□□□ 1.08
BRF1-215ENST00000549655 TMOD2Q9NZR1 351 aa21.83■■□□□ 1.08
BRF1-215ENST00000549655 ZNRF3Q9ULT6 936 aa21.83■■□□□ 1.08
BRF1-215ENST00000549655 GNA11P29992 359 aa21.82■■□□□ 1.08
BRF1-215ENST00000549655 DLGAP5Q15398 846 aa21.82■■□□□ 1.08
BRF1-215ENST00000549655 SYMPKQ92797 1274 aaKnown RBP21.82■■□□□ 1.08
BRF1-215ENST00000549655 hCG_1984214I3L0E3 225 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 FOXN1O15353 648 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 EEF2P13639 858 aaKnown RBP21.81■■□□□ 1.08
BRF1-215ENST00000549655 INF2Q27J81 1249 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 CCDC96Q2M329 555 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 GPATCH4Q5T3I0 446 aaKnown RBP21.81■■□□□ 1.08
BRF1-215ENST00000549655 ISM2Q6H9L7 571 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 AOPEPQ8N6M6 819 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 ZNF713Q8N859 430 aaPredicted RBP21.81■■□□□ 1.08
BRF1-215ENST00000549655 TRIM5Q9C035 493 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 NYAP2Q9P242 653 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 COL2A1P02458 1487 aaPredicted RBP21.81■■□□□ 1.08
BRF1-215ENST00000549655 ACTN4O43707 911 aaKnown RBP21.81■■□□□ 1.08
BRF1-215ENST00000549655 MSNP26038 577 aaKnown RBP21.81■■□□□ 1.08
BRF1-215ENST00000549655 TTBK2Q6IQ55 1244 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 C4orf32Q8N8J7 132 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 MKL1Q969V6 931 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 CSRNP1Q96S65 589 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 BPIFA3Q9BQP9 254 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 MTFR1LQ9H019 292 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.81■■□□□ 1.08
BRF1-215ENST00000549655 ZKSCAN5Q9Y2L8 839 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 PCDHA5Q9Y5H7 936 aa21.81■■□□□ 1.08
BRF1-215ENST00000549655 CLRN2A0PK11 232 aa21.8■■□□□ 1.08
BRF1-215ENST00000549655 TCP10L2B9ZVM9 353 aa21.8■■□□□ 1.08
BRF1-215ENST00000549655 SEPT2Q15019 361 aa21.8■■□□□ 1.08
BRF1-215ENST00000549655 POSTNQ15063 836 aa21.8■■□□□ 1.08
BRF1-215ENST00000549655 DALRD3Q5D0E6 543 aaKnown RBP21.8■■□□□ 1.08
BRF1-215ENST00000549655 ARL6IP4Q66PJ3 421 aaKnown RBP21.8■■□□□ 1.08
BRF1-215ENST00000549655 TMEM179Q6ZVK1 233 aa21.8■■□□□ 1.08
BRF1-215ENST00000549655 ADGRF4Q8IZF3 695 aa21.8■■□□□ 1.08
BRF1-215ENST00000549655 JMJD4Q9H9V9 463 aa21.8■■□□□ 1.08
BRF1-215ENST00000549655 ZNF70Q9UC06 446 aaPredicted RBP21.8■■□□□ 1.08
BRF1-215ENST00000549655 A0A087X0B3 334 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 ESYT2A0FGR8 921 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 GDF11O95390 407 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 CLCN1P35523 988 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 ZNF75DP51815 510 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 IL17AQ16552 155 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 ABCB5Q2M3G0 1257 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 KANK3Q6NY19 840 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 KCTD1Q719H9 257 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 KRT25Q7Z3Z0 450 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 PLA2G4DQ86XP0 818 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 DHX58Q96C10 678 aa21.79■■□□□ 1.08
BRF1-215ENST00000549655 PNMA6FA0A0J9YX94 578 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 SLC16A2P36021 539 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 ICA1Q05084 483 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 SARM1Q6SZW1 724 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 SIAH1Q8IUQ4 282 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 SPC24Q8NBT2 197 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 AGBL3Q8NEM8 1001 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 COA7Q96BR5 231 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 RAD21O60216 631 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 PRR29P0C7W0 189 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 NONOQ15233 471 aaKnown RBP eCLIP21.78■■□□□ 1.08
BRF1-215ENST00000549655 GRAMD1CQ8IYS0 662 aa21.78■■□□□ 1.08
BRF1-215ENST00000549655 PPP1R1BQ9UD71 204 aaPredicted RBP21.78■■□□□ 1.08
BRF1-215ENST00000549655 CXCL9Q07325 125 aa21.77■■□□□ 1.08
BRF1-215ENST00000549655 REXO1Q8N1G1 1221 aaKnown RBP21.77■■□□□ 1.08
BRF1-215ENST00000549655 TAOK3Q9H2K8 898 aa21.77■■□□□ 1.08
BRF1-215ENST00000549655 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.77■■□□□ 1.08
BRF1-215ENST00000549655 SLFN14P0C7P3 912 aa21.76■■□□□ 1.07
BRF1-215ENST00000549655 SLC1A4P43007 532 aa21.76■■□□□ 1.07
BRF1-215ENST00000549655 SPDYE2Q495Y8 402 aa21.76■■□□□ 1.07
BRF1-215ENST00000549655 RBM26Q5T8P6 1007 aaKnown RBP21.76■■□□□ 1.07
BRF1-215ENST00000549655 SLFN13Q68D06 897 aa21.76■■□□□ 1.07
BRF1-215ENST00000549655 DCAF4Q8WV16 495 aa21.76■■□□□ 1.07
BRF1-215ENST00000549655 FAM151AQ8WW52 585 aa21.76■■□□□ 1.07
BRF1-215ENST00000549655 CCDC34Q96HJ3 373 aa21.76■■□□□ 1.07
BRF1-215ENST00000549655 BIN2Q9UBW5 565 aaPredicted RBP21.76■■□□□ 1.07
BRF1-215ENST00000549655 HERC5Q9UII4 1024 aaKnown RBP21.76■■□□□ 1.07
BRF1-215ENST00000549655 USP17L10C9JJH3 530 aa21.76■■□□□ 1.07
BRF1-215ENST00000549655 GH2P01242 217 aa21.76■■□□□ 1.07
BRF1-215ENST00000549655 LONP1P36776 959 aaKnown RBP21.76■■□□□ 1.07
BRF1-215ENST00000549655 ADCY7P51828 1080 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms