RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 F6X3S4 739 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 PGRP06401 933 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 CANXP27824 592 aaKnown RBP6.33□□□□□ -1.4
SNRPF-202ENST00000549580 EPHB3P54753 998 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 RPS26P62854 115 aaKnown RBP6.33□□□□□ -1.4
SNRPF-202ENST00000549580 MAP3K11Q16584 847 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 GIMAP6Q6P9H5 292 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 FBXL19Q6PCT2 694 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 AGMOQ6ZNB7 445 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 DTWD2Q8NBA8 298 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 PPP1R13LQ8WUF5 828 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 TMEM87BQ96K49 555 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 GPATCH2Q9NW75 528 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 IRAK3Q9Y616 596 aa6.33□□□□□ -1.4
SNRPF-202ENST00000549580 NOTOA8MTQ0 251 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 SMARCA5O60264 1052 aaPredicted RBP6.32□□□□□ -1.4
SNRPF-202ENST00000549580 STK10O94804 968 aaKnown RBP6.32□□□□□ -1.4
SNRPF-202ENST00000549580 PF4P02776 101 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 ETV3P41162 512 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 SOX9P48436 509 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 PLP2Q04941 152 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 CAMK2GQ13555 558 aaPredicted RBP6.32□□□□□ -1.4
SNRPF-202ENST00000549580 CCDC144BQ3MJ40 725 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 TTBK2Q6IQ55 1244 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 HHIPL2Q6UWX4 724 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 FRMD5Q7Z6J6 570 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 MRPL41Q8IXM3 137 aaKnown RBP6.32□□□□□ -1.4
SNRPF-202ENST00000549580 GPR62Q9BZJ7 368 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 TRIT1Q9H3H1 467 aaKnown RBP6.32□□□□□ -1.4
SNRPF-202ENST00000549580 LUC7LQ9NQ29 371 aaKnown RBP6.32□□□□□ -1.4
SNRPF-202ENST00000549580 CEP131Q9UPN4 1083 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 TLR6Q9Y2C9 796 aa6.32□□□□□ -1.4
SNRPF-202ENST00000549580 SUPT16HQ9Y5B9 1047 aaKnown RBP6.32□□□□□ -1.4
SNRPF-202ENST00000549580 UPK3BL1B0FP48 263 aa6.31□□□□□ -1.4
SNRPF-202ENST00000549580 UPK3BL2E5RIL1 263 aa6.31□□□□□ -1.4
SNRPF-202ENST00000549580 TFE3P19532 575 aaPredicted RBP6.31□□□□□ -1.4
SNRPF-202ENST00000549580 SDHBP21912 280 aa6.31□□□□□ -1.4
SNRPF-202ENST00000549580 SRSF3P84103 164 aaKnown RBP6.31□□□□□ -1.4
SNRPF-202ENST00000549580 COL9A2Q14055 689 aaPredicted RBP6.31□□□□□ -1.4
SNRPF-202ENST00000549580 CCDC84Q86UT8 332 aaPredicted RBP6.31□□□□□ -1.4
SNRPF-202ENST00000549580 PUS7Q96PZ0 661 aaKnown RBP6.31□□□□□ -1.4
SNRPF-202ENST00000549580 BDH2Q9BUT1 245 aa6.31□□□□□ -1.4
SNRPF-202ENST00000549580 GINM1Q9NU53 330 aa6.31□□□□□ -1.4
SNRPF-202ENST00000549580 SHISA3A0PJX4 238 aa6.3□□□□□ -1.4
SNRPF-202ENST00000549580 TNFRSF1AP19438 455 aa6.3□□□□□ -1.4
SNRPF-202ENST00000549580 NASPP49321 788 aaPredicted RBP6.3□□□□□ -1.4
SNRPF-202ENST00000549580 ADGRF1Q5T601 910 aa6.3□□□□□ -1.4
SNRPF-202ENST00000549580 SLC6A19Q695T7 634 aa6.3□□□□□ -1.4
SNRPF-202ENST00000549580 ACSF2Q96CM8 615 aaPredicted RBP6.3□□□□□ -1.4
SNRPF-202ENST00000549580 STRIP2Q9ULQ0 834 aa6.3□□□□□ -1.4
SNRPF-202ENST00000549580 EFR3BQ9Y2G0 817 aa6.3□□□□□ -1.4
SNRPF-202ENST00000549580 ROBO2Q9HCK4 1378 aa6.3□□□□□ -1.4
SNRPF-202ENST00000549580 IRS4O14654 1257 aaPredicted RBP6.29□□□□□ -1.4
SNRPF-202ENST00000549580 TEKQ02763 1124 aa6.29□□□□□ -1.4
SNRPF-202ENST00000549580 FAM160A1Q05DH4 1040 aa6.29□□□□□ -1.4
SNRPF-202ENST00000549580 NBPF6Q5VWK0 638 aa6.29□□□□□ -1.4
SNRPF-202ENST00000549580 FAM196AQ6ZSG2 479 aa6.29□□□□□ -1.4
SNRPF-202ENST00000549580 SLITRK4Q8IW52 837 aa6.29□□□□□ -1.4
SNRPF-202ENST00000549580 GOLM1Q8NBJ4 401 aa6.29□□□□□ -1.4
SNRPF-202ENST00000549580 NBPF4Q96M43 638 aa6.29□□□□□ -1.4
SNRPF-202ENST00000549580 LRRC3Q9BY71 257 aa6.29□□□□□ -1.4
SNRPF-202ENST00000549580 CORINQ9Y5Q5 1042 aa6.29□□□□□ -1.4
SNRPF-202ENST00000549580 HRKO00198 91 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 CILPO75339 1184 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 CRKP46108 304 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 ZXDAP98168 799 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 SNX17Q15036 470 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 SNAP47Q5SQN1 464 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 SPPL2CQ8IUH8 684 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 MCATQ8IVS2 390 aaKnown RBP6.28□□□□□ -1.4
SNRPF-202ENST00000549580 TMEFF1Q8IYR6 380 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 PMFBP1Q8TBY8 1022 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 GPR20Q99678 358 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 G6PC3Q9BUM1 346 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 OSBPL2Q9H1P3 480 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 PIF1Q9H611 641 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 CNTD2Q9H8S5 307 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 UBP1Q9NZI7 540 aa6.28□□□□□ -1.4
SNRPF-202ENST00000549580 FAM221AA4D161 298 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 OR14I1A6ND48 311 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 N4BP3O15049 544 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 SSBP05455 408 aaKnown RBP eCLIP6.27□□□□□ -1.41
SNRPF-202ENST00000549580 APOBRQ0VD83 1088 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 SERINC3Q13530 473 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 RTP5Q14D33 572 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 CKAP2LQ8IYA6 745 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 LINC01599Q8WXQ3 324 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 NKD1Q969G9 470 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 ZSWIM4Q9H7M6 989 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 ZNF408Q9H9D4 720 aa6.27□□□□□ -1.41
SNRPF-202ENST00000549580 CNOT11Q9UKZ1 510 aaKnown RBP6.27□□□□□ -1.41
SNRPF-202ENST00000549580 TLDC2A0PJX2 215 aa6.26□□□□□ -1.41
SNRPF-202ENST00000549580 PRICKLE3O43900 615 aaPredicted RBP6.26□□□□□ -1.41
SNRPF-202ENST00000549580 USP2O75604 605 aaPredicted RBP6.26□□□□□ -1.41
SNRPF-202ENST00000549580 F13A1P00488 732 aa6.26□□□□□ -1.41
SNRPF-202ENST00000549580 VIPR1P32241 457 aa6.26□□□□□ -1.41
SNRPF-202ENST00000549580 ETFBP38117 255 aa6.26□□□□□ -1.41
SNRPF-202ENST00000549580 NLRX1Q86UT6 975 aa6.26□□□□□ -1.41
SNRPF-202ENST00000549580 ANKS4BQ8N8V4 417 aa6.26□□□□□ -1.41
SNRPF-202ENST00000549580 SIRT5Q9NXA8 310 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms