RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 hCG_1984214I3L0E3 225 aa11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 HSP90AA1P07900 732 aaKnown RBP11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 COPB2P35606 906 aa11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 COG2Q14746 738 aa11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 SHROOM1Q2M3G4 852 aaPredicted RBP11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 ZNF713Q8N859 430 aaPredicted RBP11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 GTF3C6Q969F1 213 aa11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 CAPNS2Q96L46 248 aa11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 PARK7Q99497 189 aaKnown RBP11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 SLF1Q9BQI6 1058 aa11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 RPAP3Q9H6T3 665 aaPredicted RBP11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 SEC63Q9UGP8 760 aaKnown RBP11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 BRPF3Q9ULD4 1205 aa11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 TPCN1Q9ULQ1 816 aa11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 FAM155AB1AL88 458 aaPredicted RBP11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 TMEM232C9JQI7 657 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 ZBED4O75132 1171 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 FLOT1O75955 427 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 IFNAR1P17181 557 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 XBP1P17861 261 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 GCLCP48506 637 aaPredicted RBP11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 OAZ1P54368 228 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 FAM83BQ5T0W9 1011 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 SYDE2Q5VT97 1194 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 LBX2Q6XYB7 198 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 CATSPERGQ6ZRH7 1159 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 TMTC3Q6ZXV5 915 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 CCDC84Q86UT8 332 aaPredicted RBP11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 SPICE1Q8N0Z3 855 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 RRP36Q96EU6 259 aaKnown RBP11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 INTS4Q96HW7 963 aaKnown RBP11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 TMX3Q96JJ7 454 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 RNF26Q9BY78 433 aaPredicted RBP11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 MAF1Q9H063 256 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 MAD2L2Q9UI95 211 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 MTMR7Q9Y216 660 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 STK36Q9NRP7 1315 aa11.33□□□□□ -0.6
SMARCD1-206ENST00000549274 PARP14Q460N5 1801 aa11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 GJA5P36382 358 aa11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 TM4SF4P48230 202 aa11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 KCTD1Q719H9 257 aa11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 RGS22Q8NE09 1264 aa11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 NKX2-3Q8TAU0 364 aa11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 CCDC12Q8WUD4 166 aaPredicted RBP11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 PPP1R9AQ9ULJ8 1098 aa11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 WDR33Q9C0J8 1336 aaKnown RBP11.32□□□□□ -0.6
SMARCD1-206ENST00000549274 PDHXO00330 501 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 CA12O43570 354 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 DEXIO95424 95 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 PDCP20941 246 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 CCT2P78371 535 aaKnown RBP11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 SCRN1Q12765 414 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 STK3Q13188 491 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 CUL4AQ13619 759 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 ME3Q16798 604 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 CYP4F22Q6NT55 531 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 NOL8Q76FK4 1167 aaKnown RBP11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 SMCR8Q8TEV9 937 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 BRI3BPQ8WY22 251 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 MYL10Q9BUA6 226 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 GLT8D2Q9H1C3 349 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 RIOX1Q9H6W3 641 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 SENP2Q9HC62 589 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 ZFYVE28Q9HCC9 887 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 GPCPD1Q9NPB8 672 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 HPS5Q9UPZ3 1129 aa11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 FRMPD2Q68DX3 1309 aaPredicted RBP11.31□□□□□ -0.6
SMARCD1-206ENST00000549274 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 BTBD19C9JJ37 291 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 CCNA1P78396 465 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 KIF23Q02241 960 aaPredicted RBP11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 MAP2K1Q02750 393 aaPredicted RBP11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 COL9A3Q14050 684 aaPredicted RBP11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 TKFCQ3LXA3 575 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 PPP1R18Q6NYC8 613 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 CCDC83Q8IWF9 413 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 CCDC144CPQ8IYA2 1237 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 SAMD3Q8N6K7 520 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 FAM184AQ8NB25 1140 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 CCDC148Q8NFR7 591 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 KIFC2Q96AC6 838 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 ASCC2Q9H1I8 757 aaPredicted RBP11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 SMC3Q9UQE7 1217 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 RABGAP1Q9Y3P9 1069 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 CNTNAP5Q8WYK1 1306 aa11.3□□□□□ -0.6
SMARCD1-206ENST00000549274 A0A0G2JMZ2 1700 aa11.29□□□□□ -0.6
SMARCD1-206ENST00000549274 BAZ2BQ9UIF8 2168 aaKnown RBP11.29□□□□□ -0.6
SMARCD1-206ENST00000549274 ATP2A1O14983 1001 aa11.29□□□□□ -0.6
SMARCD1-206ENST00000549274 ZBTB5O15062 677 aa11.29□□□□□ -0.6
SMARCD1-206ENST00000549274 PRPF3O43395 683 aaKnown RBP11.29□□□□□ -0.6
SMARCD1-206ENST00000549274 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
SMARCD1-206ENST00000549274 FMNL1O95466 1100 aaPredicted RBP11.29□□□□□ -0.6
SMARCD1-206ENST00000549274 SLC25A27O95847 323 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms