RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 PGK2P07205 417 aa14.75□□□□□ -0.05
DDX54-206ENST00000549271 POU3F3P20264 500 aaPredicted RBP14.75□□□□□ -0.05
DDX54-206ENST00000549271 MICALL1Q8N3F8 863 aa14.75□□□□□ -0.05
DDX54-206ENST00000549271 KHSRPQ92945 711 aaKnown RBP eCLIP14.75□□□□□ -0.05
DDX54-206ENST00000549271 ATG4CQ96DT6 458 aa14.75□□□□□ -0.05
DDX54-206ENST00000549271 MYADML2A6NDP7 307 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 TLL1O43897 1013 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 SLC25A27O95847 323 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 CST5P28325 142 aaPredicted RBP14.74□□□□□ -0.05
DDX54-206ENST00000549271 TMEM132BQ14DG7 1078 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 HSP90AB4PQ58FF6 505 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 TTC6Q86TZ1 520 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 FAM126BQ8IXS8 530 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 MAGEB6Q8N7X4 407 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 MIGA1Q8NAN2 632 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 GLT1D1Q96MS3 346 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 MMP19Q99542 508 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 PPP1R12CQ9BZL4 782 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 MTIF3Q9H2K0 278 aaKnown RBP14.74□□□□□ -0.05
DDX54-206ENST00000549271 ANTXR1Q9H6X2 564 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 NAV1Q8NEY1 1877 aa14.74□□□□□ -0.05
DDX54-206ENST00000549271 MYH8P13535 1937 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 FGBP02675 491 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 CYP2C18P33260 490 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 USP5P45974 858 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 PLCD1P51178 756 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 GABPAQ06546 454 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 RPAP2Q8IXW5 612 aaPredicted RBP14.73□□□□□ -0.05
DDX54-206ENST00000549271 RIOK1Q9BRS2 568 aaKnown RBP14.73□□□□□ -0.05
DDX54-206ENST00000549271 ADAMTS5Q9UNA0 930 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 CNPY2Q9Y2B0 182 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 EXOC6BQ9Y2D4 811 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 MTCH2Q9Y6C9 303 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 MCM3APO60318 1980 aa14.73□□□□□ -0.05
DDX54-206ENST00000549271 FAM86C2PA6NEL3 165 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 ARVCFO00192 962 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 DUSP11O75319 330 aaKnown RBP14.72□□□□□ -0.05
DDX54-206ENST00000549271 FLOT1O75955 427 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 CD4P01730 458 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 KCTD2Q14681 263 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 TTF1Q15361 905 aaPredicted RBP14.72□□□□□ -0.05
DDX54-206ENST00000549271 SKIV2LQ15477 1246 aaKnown RBP14.72□□□□□ -0.05
DDX54-206ENST00000549271 PPP2R2DQ66LE6 453 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 AACSQ86V21 672 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 RIOX2Q8IUF8 465 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 MSL3Q8N5Y2 521 aaKnown RBP14.72□□□□□ -0.05
DDX54-206ENST00000549271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.72□□□□□ -0.05
DDX54-206ENST00000549271 FAM184BQ9ULE4 1060 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 COG5Q9UP83 839 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 PCDHA11Q9Y5I1 949 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 WDFY4Q6ZS81 3184 aa14.72□□□□□ -0.05
DDX54-206ENST00000549271 A0A0U1RQG5 324 aaPredicted RBP14.71□□□□□ -0.05
DDX54-206ENST00000549271 APBB1O00213 710 aa14.71□□□□□ -0.05
DDX54-206ENST00000549271 SNAI1O95863 264 aaPredicted RBP14.71□□□□□ -0.05
DDX54-206ENST00000549271 ASGR1P07306 291 aa14.71□□□□□ -0.05
DDX54-206ENST00000549271 MYOGP15173 224 aa14.71□□□□□ -0.05
DDX54-206ENST00000549271 RABGGTBP53611 331 aa14.71□□□□□ -0.05
DDX54-206ENST00000549271 IRX5P78411 483 aaPredicted RBP14.71□□□□□ -0.05
DDX54-206ENST00000549271 RHPN1Q8TCX5 695 aa14.71□□□□□ -0.05
DDX54-206ENST00000549271 SNX27Q96L92 541 aa14.71□□□□□ -0.05
DDX54-206ENST00000549271 BRWD1Q9NSI6 2320 aa14.7□□□□□ -0.06
DDX54-206ENST00000549271 PI4K2BG5E9Z4 385 aa14.7□□□□□ -0.06
DDX54-206ENST00000549271 TLR3O15455 904 aaKnown RBP14.7□□□□□ -0.06
DDX54-206ENST00000549271 OTOP2Q7RTS6 562 aa14.7□□□□□ -0.06
DDX54-206ENST00000549271 SIAH1Q8IUQ4 282 aa14.7□□□□□ -0.06
DDX54-206ENST00000549271 PCSK9Q8NBP7 692 aaKnown RBP14.7□□□□□ -0.06
DDX54-206ENST00000549271 UPF3AQ9H1J1 476 aaKnown RBP14.7□□□□□ -0.06
DDX54-206ENST00000549271 CHMP4BQ9H444 224 aaKnown RBP14.7□□□□□ -0.06
DDX54-206ENST00000549271 MAGEB6P1A0A0J9YX57 407 aa14.69□□□□□ -0.06
DDX54-206ENST00000549271 ADCY6O43306 1168 aa14.69□□□□□ -0.06
DDX54-206ENST00000549271 C6orf222P0C671 652 aaPredicted RBP14.69□□□□□ -0.06
DDX54-206ENST00000549271 PDE6AP16499 860 aa14.69□□□□□ -0.06
DDX54-206ENST00000549271 GJA9P57773 515 aa14.69□□□□□ -0.06
DDX54-206ENST00000549271 EVX2Q03828 476 aa14.69□□□□□ -0.06
DDX54-206ENST00000549271 MAMDC4Q6UXC1 1216 aa14.69□□□□□ -0.06
DDX54-206ENST00000549271 SPICE1Q8N0Z3 855 aa14.69□□□□□ -0.06
DDX54-206ENST00000549271 CLASRPQ8N2M8 674 aaKnown RBP14.69□□□□□ -0.06
DDX54-206ENST00000549271 VWCEQ96DN2 955 aa14.69□□□□□ -0.06
DDX54-206ENST00000549271 KIF1BPQ96EK5 621 aa14.69□□□□□ -0.06
DDX54-206ENST00000549271 ZNF214Q9UL59 606 aaPredicted RBP14.69□□□□□ -0.06
DDX54-206ENST00000549271 TMX2Q9Y320 296 aa14.69□□□□□ -0.06
DDX54-206ENST00000549271 UMODL1Q5DID0 1318 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 TCRBV5S4A2TA0A5A2 114 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 SMIM22K7EJ46 135 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 RFXAPO00287 272 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 MPHOSPH10O00566 681 aaKnown RBP14.68□□□□□ -0.06
DDX54-206ENST00000549271 WDR46O15213 610 aaKnown RBP14.68□□□□□ -0.06
DDX54-206ENST00000549271 CTAGE5O15320 804 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 GTPBP6O43824 516 aaPredicted RBP14.68□□□□□ -0.06
DDX54-206ENST00000549271 HMMRO75330 724 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 MRE11P49959 708 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 SLC9C2Q5TAH2 1124 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 TMEM179Q6ZVK1 233 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 SLC43A3Q8NBI5 491 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 VTI1AQ96AJ9 217 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 CRNKL1Q9BZJ0 848 aaKnown RBP14.68□□□□□ -0.06
DDX54-206ENST00000549271 HIPK3Q9H422 1215 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 VCPKMTQ9H867 229 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 IL1RAPL2Q9NP60 686 aa14.68□□□□□ -0.06
DDX54-206ENST00000549271 SLC4A7Q9Y6M7 1214 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms