RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CAND2O75155 1236 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 USP11P51784 963 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 PTH1RQ03431 593 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 MEA1Q16626 185 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 OLFML2BQ68BL8 750 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 TRIML1Q8N9V2 468 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 ENGASEQ8NFI3 743 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 EPS8L1Q8TE68 723 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 IQCDQ96DY2 449 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 PUS7LQ9H0K6 701 aaKnown RBP5.71□□□□□ -1.49
SCAF11-212ENST00000549162 ZBTB3Q9H5J0 574 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 SEC31BQ9NQW1 1179 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 IL17RBQ9NRM6 502 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 NOVA2Q9UNW9 492 aaKnown RBP5.71□□□□□ -1.49
SCAF11-212ENST00000549162 FGAP02671 866 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 PDIA3P30101 505 aaKnown RBP5.71□□□□□ -1.5
SCAF11-212ENST00000549162 CDC42EP5Q6NZY7 148 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 GPR65Q8IYL9 337 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 LINC01465Q8N7H1 131 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 OTUD7AQ8TE49 926 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-212ENST00000549162 HVCN1Q96D96 273 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 DNAJC2Q99543 621 aaKnown RBP5.71□□□□□ -1.5
SCAF11-212ENST00000549162 CGNQ9P2M7 1197 aaKnown RBP5.71□□□□□ -1.5
SCAF11-212ENST00000549162 PI4KBQ9UBF8 816 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 AFG3L2Q9Y4W6 797 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 NUTM2BA6NNL0 878 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-212ENST00000549162 NUTM2EB1AL46 878 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-212ENST00000549162 MYL6BP14649 208 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 CST5P28325 142 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-212ENST00000549162 IMMTQ16891 758 aaKnown RBP5.71□□□□□ -1.5
SCAF11-212ENST00000549162 PADI6Q6TGC4 694 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 TBC1D10CQ8IV04 446 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 NUTM2AQ8IVF1 878 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-212ENST00000549162 SPATA18Q8TC71 538 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 NEK1Q96PY6 1258 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 NACAP1Q9BZK3 213 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 SH2D4AQ9H788 454 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 MTMR4Q9NYA4 1195 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 MUC22E2RYF6 1773 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-212ENST00000549162 DENND4CQ5VZ89 1909 aa5.71□□□□□ -1.5
SCAF11-212ENST00000549162 ATP9BO43861 1147 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 FDPSP14324 419 aaKnown RBP5.7□□□□□ -1.5
SCAF11-212ENST00000549162 CRKP46108 304 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 INHBEP58166 350 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 CTDSPL2Q05D32 466 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 C9orf131Q5VYM1 1079 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 PNMA8AQ86V59 439 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-212ENST00000549162 MTMR9Q96QG7 549 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 CCSER1Q9C0I3 900 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 RIC8AQ9NPQ8 531 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 TUBE1Q9UJT0 475 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 FEM1BQ9UK73 627 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 GLTPD2A6NH11 291 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 ST18O60284 1047 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 SLC3A2P08195 630 aaKnown RBP5.7□□□□□ -1.5
SCAF11-212ENST00000549162 ERCC5P28715 1186 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-212ENST00000549162 PTPN11Q06124 597 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-212ENST00000549162 GRM1Q13255 1194 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 UVSSAQ2YD98 709 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 SARM1Q6SZW1 724 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 TEKT1Q969V4 418 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 CEP89Q96ST8 783 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 ZSCAN10Q96SZ4 725 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-212ENST00000549162 KCNMB3Q9NPA1 279 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 CHMP5Q9NZZ3 219 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 SQORQ9Y6N5 450 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 DPEP1P16444 411 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 USP14P54578 494 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 HSP90AA2PQ14568 343 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-212ENST00000549162 TMEM119Q4V9L6 283 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 MICAL1Q8TDZ2 1067 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 ZNF526Q8TF50 670 aaPredicted RBP5.7□□□□□ -1.5
SCAF11-212ENST00000549162 WWC3Q9ULE0 1092 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 MYH11P35749 1972 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 SYNGAP1Q96PV0 1343 aa5.7□□□□□ -1.5
SCAF11-212ENST00000549162 CLSTN1O94985 981 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 PIGRP01833 764 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 LDHBP07195 334 aaKnown RBP5.69□□□□□ -1.5
SCAF11-212ENST00000549162 CRACR2BQ8N4Y2 399 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-212ENST00000549162 DNERQ8NFT8 737 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 IWS1Q96ST2 819 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 RBM42Q9BTD8 480 aaKnown RBP5.69□□□□□ -1.5
SCAF11-212ENST00000549162 BARHL2Q9NY43 387 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 AATFQ9NY61 560 aaKnown RBP eCLIP5.69□□□□□ -1.5
SCAF11-212ENST00000549162 ZNF70Q9UC06 446 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-212ENST00000549162 COL4A3Q01955 1670 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 LGR5O75473 907 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 DEXIO95424 95 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 BECN1Q14457 450 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 KCNB1Q14721 858 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 APOA5Q6Q788 366 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 SHISA4Q96DD7 197 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 MPHOSPH8Q99549 860 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 KATNBL1Q9H079 304 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 TAOK3Q9H2K8 898 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 PA2G4Q9UQ80 394 aaKnown RBP5.69□□□□□ -1.5
SCAF11-212ENST00000549162 EXOC6BQ9Y2D4 811 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 WDR33Q9C0J8 1336 aaKnown RBP5.69□□□□□ -1.5
SCAF11-212ENST00000549162 RASSF10A6NK89 507 aa5.69□□□□□ -1.5
SCAF11-212ENST00000549162 POU2F2P09086 479 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms