RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 TMEM232C9JQI7 657 aa13.04□□□□□ -0.32
SCRN3-212ENST00000548868 PRPF3O43395 683 aaKnown RBP13.04□□□□□ -0.32
SCRN3-212ENST00000548868 SLC4A3P48751 1232 aa13.04□□□□□ -0.32
SCRN3-212ENST00000548868 ZNF157P51786 506 aaPredicted RBP13.04□□□□□ -0.32
SCRN3-212ENST00000548868 GTF2A2P52657 109 aa13.04□□□□□ -0.32
SCRN3-212ENST00000548868 AKAP17AQ02040 695 aaKnown RBP13.04□□□□□ -0.32
SCRN3-212ENST00000548868 WASF1Q92558 559 aa13.04□□□□□ -0.32
SCRN3-212ENST00000548868 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
SCRN3-212ENST00000548868 SLC26A6Q9BXS9 759 aa13.04□□□□□ -0.32
SCRN3-212ENST00000548868 ABT1Q9ULW3 272 aaKnown RBP13.04□□□□□ -0.32
SCRN3-212ENST00000548868 USP17L15C9J2P7 530 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 USP17L13C9JLJ4 530 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 USP17L11C9JVI0 530 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 USP17L18D6R9N7 530 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 USP17L22D6RA61 530 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 USP17L17D6RBQ6 530 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 USP17L19D6RCP7 530 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 USP17L20D6RJB6 530 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 JAK2O60674 1132 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 DEXIO95424 95 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 CETPP11597 493 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 GJB2P29033 226 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 USP17L24Q0WX57 530 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
SCRN3-212ENST00000548868 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 RASAL3Q86YV0 1011 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 CMTR1Q8N1G2 835 aaKnown RBP13.03□□□□□ -0.32
SCRN3-212ENST00000548868 FAM184AQ8NB25 1140 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 PHKBQ93100 1093 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 CCDC102AQ96A19 550 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 RPAP3Q9H6T3 665 aaPredicted RBP13.03□□□□□ -0.32
SCRN3-212ENST00000548868 ORC3Q9UBD5 711 aaPredicted RBP13.03□□□□□ -0.32
SCRN3-212ENST00000548868 COL11A1P12107 1806 aaPredicted RBP13.03□□□□□ -0.32
SCRN3-212ENST00000548868 CYTH3O43739 400 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 SLC10A3P09131 477 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 FDX1P10109 184 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 PDIA4P13667 645 aaKnown RBP13.03□□□□□ -0.32
SCRN3-212ENST00000548868 HOXA7P31268 230 aaPredicted RBP13.03□□□□□ -0.32
SCRN3-212ENST00000548868 APLP1P51693 650 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 PABPC4Q13310 644 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCRN3-212ENST00000548868 DGKZQ13574 1117 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 GSE1Q14687 1217 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 GADL1Q6ZQY3 521 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 CATSPERGQ6ZRH7 1159 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 ADGRF4Q8IZF3 695 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 CCDC82Q8N4S0 544 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 PRPF38AQ8NAV1 312 aaKnown RBP13.03□□□□□ -0.32
SCRN3-212ENST00000548868 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 RGS22Q8NE09 1264 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 MTMR8Q96EF0 704 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 RRP36Q96EU6 259 aaKnown RBP13.03□□□□□ -0.32
SCRN3-212ENST00000548868 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 AGTPBP1Q9UPW5 1226 aa13.03□□□□□ -0.32
SCRN3-212ENST00000548868 MYPNQ86TC9 1320 aa13.02□□□□□ -0.32
SCRN3-212ENST00000548868 FDPSP14324 419 aaKnown RBP13.02□□□□□ -0.33
SCRN3-212ENST00000548868 PDCP20941 246 aa13.02□□□□□ -0.33
SCRN3-212ENST00000548868 SLC16A2P36021 539 aa13.02□□□□□ -0.33
SCRN3-212ENST00000548868 MOGSQ13724 837 aa13.02□□□□□ -0.33
SCRN3-212ENST00000548868 SLC35G1Q2M3R5 365 aa13.02□□□□□ -0.33
SCRN3-212ENST00000548868 DDX11Q96FC9 970 aa13.02□□□□□ -0.33
SCRN3-212ENST00000548868 MS4A4AQ96JQ5 239 aa13.02□□□□□ -0.33
SCRN3-212ENST00000548868 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
SCRN3-212ENST00000548868 JMJD4Q9H9V9 463 aa13.02□□□□□ -0.33
SCRN3-212ENST00000548868 SEC63Q9UGP8 760 aaKnown RBP13.02□□□□□ -0.33
SCRN3-212ENST00000548868 PRR12Q9ULL5 1215 aa13.02□□□□□ -0.33
SCRN3-212ENST00000548868 V9GY48 417 aaPredicted RBP13.02□□□□□ -0.33
SCRN3-212ENST00000548868 A0A0G2JMZ2 1700 aa13.01□□□□□ -0.33
SCRN3-212ENST00000548868 MANSC4A6NHS7 340 aaPredicted RBP13.01□□□□□ -0.33
SCRN3-212ENST00000548868 hCG_1984214I3L0E3 225 aa13.01□□□□□ -0.33
SCRN3-212ENST00000548868 FLOT1O75955 427 aa13.01□□□□□ -0.33
SCRN3-212ENST00000548868 PFKFB3Q16875 520 aaPredicted RBP13.01□□□□□ -0.33
SCRN3-212ENST00000548868 FAM177A1Q8N128 213 aaPredicted RBP13.01□□□□□ -0.33
SCRN3-212ENST00000548868 ZNF713Q8N859 430 aaPredicted RBP13.01□□□□□ -0.33
SCRN3-212ENST00000548868 CPVLQ9H3G5 476 aa13.01□□□□□ -0.33
SCRN3-212ENST00000548868 VAT1LQ9HCJ6 419 aa13.01□□□□□ -0.33
SCRN3-212ENST00000548868 HOXC10Q9NYD6 342 aa13.01□□□□□ -0.33
SCRN3-212ENST00000548868 PPP1R9AQ9ULJ8 1098 aa13.01□□□□□ -0.33
SCRN3-212ENST00000548868 SLC45A1Q9Y2W3 748 aa13.01□□□□□ -0.33
SCRN3-212ENST00000548868 CCL15-CCL14A0A0B4J2E2 113 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 PNMA6FA0A0J9YX94 578 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 TESPA1A2RU30 521 aaPredicted RBP13□□□□□ -0.33
SCRN3-212ENST00000548868 ZBTB5O15062 677 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 SCG2P13521 617 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 TRAF1Q13077 416 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 COG2Q14746 738 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 PKN1Q16512 942 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 CCL15Q16663 113 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 TREML2Q5T2D2 321 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 KIFC2Q96AC6 838 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 PIGSQ96S52 555 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 RANBP17Q9H2T7 1088 aaKnown RBP13□□□□□ -0.33
SCRN3-212ENST00000548868 PNMA2Q9UL42 364 aa13□□□□□ -0.33
SCRN3-212ENST00000548868 RASSF10A6NK89 507 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 FAM155AB1AL88 458 aaPredicted RBP12.99□□□□□ -0.33
SCRN3-212ENST00000548868 PPFIA3O75145 1194 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 XBP1P17861 261 aa12.99□□□□□ -0.33
SCRN3-212ENST00000548868 OSBPP22059 807 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms