RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 SEZ6LQ9BYH1 1024 aa11.42□□□□□ -0.58
GCN1-205ENST00000548821 ZNF214Q9UL59 606 aaPredicted RBP11.42□□□□□ -0.58
GCN1-205ENST00000548821 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
GCN1-205ENST00000548821 MYO5AQ9Y4I1 1855 aaKnown RBP11.42□□□□□ -0.58
GCN1-205ENST00000548821 MROH7Q68CQ1 1323 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 MOXD2PA6NHM9 499 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 ASB14A6NK59 587 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 B4DLN1 442 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 HIP1O00291 1037 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 IGHA2P01877 340 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 MRPL12P52815 198 aaKnown RBP11.41□□□□□ -0.58
GCN1-205ENST00000548821 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
GCN1-205ENST00000548821 SLFNL1Q499Z3 407 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 CCDC178Q5BJE1 867 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 KIAA1755Q5JYT7 1200 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 GJC2Q5T442 439 aaPredicted RBP11.41□□□□□ -0.58
GCN1-205ENST00000548821 MAMDC4Q6UXC1 1216 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 CPXCR1Q8N123 301 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 STK11IPQ8N1F8 1099 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 PI4K2BQ8TCG2 481 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 STAG1Q8WVM7 1258 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 CEP95Q96GE4 821 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 ABHD16BQ9H3Z7 469 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 RNF41Q9H4P4 317 aaPredicted RBP11.41□□□□□ -0.58
GCN1-205ENST00000548821 SLC38A10Q9HBR0 1119 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 FBXO28Q9NVF7 368 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 STX8Q9UNK0 236 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 ATP11BQ9Y2G3 1177 aa11.41□□□□□ -0.58
GCN1-205ENST00000548821 IGKV6D-41A0A0C4DH26 115 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 DCDC2CA8MYV0 355 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 TMEM232C9JQI7 657 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 M0R2C6 588 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 ZEB2O60315 1214 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 SLC4A3P48751 1232 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 RTP1P59025 263 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 LRRC41Q15345 812 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 ALX1Q15699 326 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 MCMDC2Q4G0Z9 681 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.4□□□□□ -0.58
GCN1-205ENST00000548821 CLEC10AQ8IUN9 316 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
GCN1-205ENST00000548821 ACAD9Q9H845 621 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 PHF24Q9UPV7 400 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 PCDHB15Q9Y5E8 787 aa11.4□□□□□ -0.58
GCN1-205ENST00000548821 DOCK3Q8IZD9 2030 aa11.4□□□□□ -0.59
GCN1-205ENST00000548821 TRIM6-TRIM34B2RNG4 842 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 RANBP6O60518 1105 aaKnown RBP11.39□□□□□ -0.59
GCN1-205ENST00000548821 DUSP11O75319 330 aaKnown RBP11.39□□□□□ -0.59
GCN1-205ENST00000548821 PRDM1O75626 825 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 PGK2P07205 417 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 ADCYAP1R1P41586 468 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 MDM2Q00987 491 aaPredicted RBP11.39□□□□□ -0.59
GCN1-205ENST00000548821 EVX2Q03828 476 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 DDX60LQ5H9U9 1706 aaKnown RBP11.39□□□□□ -0.59
GCN1-205ENST00000548821 TRPV1Q8NER1 839 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 DCAF4Q8WV16 495 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 GLT1D1Q96MS3 346 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 TTC14Q96N46 770 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 TOX2Q96NM4 488 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 PRDM5Q9NQX1 630 aaPredicted RBP11.39□□□□□ -0.59
GCN1-205ENST00000548821 TOMM22Q9NS69 142 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 ANAPC4Q9UJX5 808 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 PLIN4Q96Q06 1357 aa11.39□□□□□ -0.59
GCN1-205ENST00000548821 ZNF236Q9UL36 1845 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 LOC102724159A0A0B4J2E5 919 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 POTEB2H3BUK9 544 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 CABYRO75952 493 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 PDE1AP54750 535 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 ACVR2BQ13705 512 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 SNX17Q15036 470 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 PWP2Q15269 919 aaKnown RBP11.38□□□□□ -0.59
GCN1-205ENST00000548821 PRAMEF19Q5SWL8 479 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 TSHZ3Q63HK5 1081 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 FAM109BQ6ICB4 259 aaPredicted RBP11.38□□□□□ -0.59
GCN1-205ENST00000548821 CCDC129Q6ZRS4 1044 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 DEFB123Q8N688 67 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 REPS2Q8NFH8 660 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 VTI1AQ96AJ9 217 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 NUP88Q99567 741 aaPredicted RBP11.38□□□□□ -0.59
GCN1-205ENST00000548821 MAF1Q9H063 256 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 RAVER2Q9HCJ3 691 aaKnown RBP11.38□□□□□ -0.59
GCN1-205ENST00000548821 EPB41L4AQ9HCS5 686 aaPredicted RBP11.38□□□□□ -0.59
GCN1-205ENST00000548821 STARD7Q9NQZ5 370 aa11.38□□□□□ -0.59
GCN1-205ENST00000548821 ADD3Q9UEY8 706 aaKnown RBP11.38□□□□□ -0.59
GCN1-205ENST00000548821 ZHX1Q9UKY1 873 aaPredicted RBP11.38□□□□□ -0.59
GCN1-205ENST00000548821 ELP1O95163 1332 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 PLXNB2O15031 1838 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 TLR3O15455 904 aaKnown RBP11.37□□□□□ -0.59
GCN1-205ENST00000548821 ORC4O43929 436 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 CHGBP05060 677 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 CLTBP09497 229 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
GCN1-205ENST00000548821 RAG1P15918 1043 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 MCCP23508 829 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 BRDTQ58F21 947 aaPredicted RBP11.37□□□□□ -0.59
GCN1-205ENST00000548821 FAM47AQ5JRC9 791 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 MFSD6Q6ZSS7 791 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 SLC17A8Q8NDX2 589 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 AP5M1Q9H0R1 490 aa11.37□□□□□ -0.59
GCN1-205ENST00000548821 TCP11L1Q9NUJ3 509 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms