RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 FCER1AP12319 257 aa27.36■■□□□ 1.97
CACNB3-208ENST00000548279 ANKLE1Q8NAG6 615 aa27.36■■□□□ 1.97
CACNB3-208ENST00000548279 DPF3Q92784 378 aa27.36■■□□□ 1.97
CACNB3-208ENST00000548279 FEM1BQ9UK73 627 aa27.36■■□□□ 1.97
CACNB3-208ENST00000548279 H0YGN5 161 aa27.35■■□□□ 1.97
CACNB3-208ENST00000548279 MCCP23508 829 aa27.35■■□□□ 1.97
CACNB3-208ENST00000548279 MFAP1P55081 439 aaKnown RBP27.35■■□□□ 1.97
CACNB3-208ENST00000548279 OLFML2BQ68BL8 750 aa27.35■■□□□ 1.97
CACNB3-208ENST00000548279 SNRNP48Q6IEG0 339 aaKnown RBP27.35■■□□□ 1.97
CACNB3-208ENST00000548279 GMCL1Q96IK5 515 aa27.35■■□□□ 1.97
CACNB3-208ENST00000548279 MMP19Q99542 508 aa27.35■■□□□ 1.97
CACNB3-208ENST00000548279 HTATIP2Q9BUP3 242 aa27.35■■□□□ 1.97
CACNB3-208ENST00000548279 TEX13BQ9BXU2 312 aa27.35■■□□□ 1.97
CACNB3-208ENST00000548279 SLC38A10Q9HBR0 1119 aa27.35■■□□□ 1.97
CACNB3-208ENST00000548279 PLXNA1Q9UIW2 1896 aa27.35■■□□□ 1.97
CACNB3-208ENST00000548279 TMEM232C9JQI7 657 aa27.34■■□□□ 1.97
CACNB3-208ENST00000548279 PGK2P07205 417 aa27.34■■□□□ 1.97
CACNB3-208ENST00000548279 CYBAP13498 195 aa27.34■■□□□ 1.97
CACNB3-208ENST00000548279 CPXCR1Q8N123 301 aa27.34■■□□□ 1.97
CACNB3-208ENST00000548279 STAG1Q8WVM7 1258 aa27.34■■□□□ 1.97
CACNB3-208ENST00000548279 MAML3Q96JK9 1138 aa27.34■■□□□ 1.97
CACNB3-208ENST00000548279 RAVER2Q9HCJ3 691 aaKnown RBP27.34■■□□□ 1.97
CACNB3-208ENST00000548279 HIP1O00291 1037 aa27.33■■□□□ 1.97
CACNB3-208ENST00000548279 AKNAD1Q5T1N1 836 aa27.33■■□□□ 1.97
CACNB3-208ENST00000548279 KCTD1Q719H9 257 aa27.33■■□□□ 1.97
CACNB3-208ENST00000548279 NECAB2Q7Z6G3 386 aa27.33■■□□□ 1.97
CACNB3-208ENST00000548279 NEDD4P46934 1319 aa27.33■■□□□ 1.97
CACNB3-208ENST00000548279 ATP2A1O14983 1001 aa27.32■■□□□ 1.96
CACNB3-208ENST00000548279 ZBED4O75132 1171 aa27.32■■□□□ 1.96
CACNB3-208ENST00000548279 SLC1A4P43007 532 aa27.32■■□□□ 1.96
CACNB3-208ENST00000548279 ISY1Q9ULR0 285 aaKnown RBP27.32■■□□□ 1.96
CACNB3-208ENST00000548279 MTMR7Q9Y216 660 aa27.32■■□□□ 1.96
CACNB3-208ENST00000548279 SLC4A3P48751 1232 aa27.31■■□□□ 1.96
CACNB3-208ENST00000548279 ZNF792Q3KQV3 632 aa27.31■■□□□ 1.96
CACNB3-208ENST00000548279 PPP4R3BQ5MIZ7 849 aa27.31■■□□□ 1.96
CACNB3-208ENST00000548279 TCP11L1Q9NUJ3 509 aa27.31■■□□□ 1.96
CACNB3-208ENST00000548279 CNGA1P29973 690 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 COPB2P35606 906 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 STAT2P52630 851 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 KCTD2Q14681 263 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 PRAMEF19Q5SWL8 479 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 RCSD1Q6JBY9 416 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 MFSD6Q6ZSS7 791 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 TMEM47Q9BQJ4 181 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 DSCC1Q9BVC3 393 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 SLC5A4Q9NY91 659 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 DDX20Q9UHI6 824 aaKnown RBP27.3■■□□□ 1.96
CACNB3-208ENST00000548279 PFASO15067 1338 aa27.3■■□□□ 1.96
CACNB3-208ENST00000548279 ZNF536O15090 1300 aa27.29■■□□□ 1.96
CACNB3-208ENST00000548279 ZNF213O14771 459 aa27.28■■□□□ 1.96
CACNB3-208ENST00000548279 SNAP25P60880 206 aa27.28■■□□□ 1.96
CACNB3-208ENST00000548279 FAM160B2Q86V87 743 aa27.28■■□□□ 1.96
CACNB3-208ENST00000548279 C11orf49Q9H6J7 331 aa27.28■■□□□ 1.96
CACNB3-208ENST00000548279 CTDP1Q9Y5B0 961 aaPredicted RBP27.28■■□□□ 1.96
CACNB3-208ENST00000548279 PLA2G6O60733 806 aa27.27■■□□□ 1.96
CACNB3-208ENST00000548279 PCP11498 1178 aaKnown RBP27.27■■□□□ 1.96
CACNB3-208ENST00000548279 COL6A1P12109 1028 aa27.27■■□□□ 1.96
CACNB3-208ENST00000548279 IKQ13123 557 aaPredicted RBP27.27■■□□□ 1.96
CACNB3-208ENST00000548279 ANO1Q5XXA6 986 aa27.27■■□□□ 1.96
CACNB3-208ENST00000548279 CHURC1Q8WUH1 139 aa27.27■■□□□ 1.96
CACNB3-208ENST00000548279 CEP290O15078 2479 aa27.27■■□□□ 1.96
CACNB3-208ENST00000548279 DNAJC25-GNG10A0A024R161 153 aa27.26■■□□□ 1.95
CACNB3-208ENST00000548279 TOP1P11387 765 aaKnown RBP27.26■■□□□ 1.95
CACNB3-208ENST00000548279 OAZ1P54368 228 aa27.26■■□□□ 1.95
CACNB3-208ENST00000548279 TTBK2Q6IQ55 1244 aa27.26■■□□□ 1.95
CACNB3-208ENST00000548279 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.26■■□□□ 1.95
CACNB3-208ENST00000548279 DCAF4Q8WV16 495 aa27.26■■□□□ 1.95
CACNB3-208ENST00000548279 AGBL1Q96MI9 1066 aa27.26■■□□□ 1.95
CACNB3-208ENST00000548279 ZKSCAN3Q9BRR0 538 aa27.26■■□□□ 1.95
CACNB3-208ENST00000548279 RNF41Q9H4P4 317 aaPredicted RBP27.26■■□□□ 1.95
CACNB3-208ENST00000548279 PRR12Q9ULL5 1215 aa27.26■■□□□ 1.95
CACNB3-208ENST00000548279 DIS3Q9Y2L1 958 aaKnown RBP27.26■■□□□ 1.95
CACNB3-208ENST00000548279 CHMLP26374 656 aa27.25■■□□□ 1.95
CACNB3-208ENST00000548279 CCDC96Q2M329 555 aa27.25■■□□□ 1.95
CACNB3-208ENST00000548279 TINF2Q9BSI4 451 aa27.25■■□□□ 1.95
CACNB3-208ENST00000548279 FRMPD2Q68DX3 1309 aaPredicted RBP27.24■■□□□ 1.95
CACNB3-208ENST00000548279 EVI5O60447 810 aa27.24■■□□□ 1.95
CACNB3-208ENST00000548279 MSCO60682 206 aa27.24■■□□□ 1.95
CACNB3-208ENST00000548279 FDX1P10109 184 aa27.24■■□□□ 1.95
CACNB3-208ENST00000548279 TAL1P17542 331 aaPredicted RBP27.24■■□□□ 1.95
CACNB3-208ENST00000548279 ESR2Q92731 530 aa27.24■■□□□ 1.95
CACNB3-208ENST00000548279 FGD4Q96M96 766 aa27.24■■□□□ 1.95
CACNB3-208ENST00000548279 HOMER2Q9NSB8 354 aa27.24■■□□□ 1.95
CACNB3-208ENST00000548279 COLQQ9Y215 455 aaPredicted RBP27.24■■□□□ 1.95
CACNB3-208ENST00000548279 B4E1Z4 1266 aa27.23■■□□□ 1.95
CACNB3-208ENST00000548279 SEPT4O43236 478 aa27.23■■□□□ 1.95
CACNB3-208ENST00000548279 KDM4AO75164 1064 aa27.23■■□□□ 1.95
CACNB3-208ENST00000548279 SLC16A2P36021 539 aa27.23■■□□□ 1.95
CACNB3-208ENST00000548279 CCDC174Q6PII3 467 aa27.23■■□□□ 1.95
CACNB3-208ENST00000548279 CHST13Q8NET6 341 aa27.23■■□□□ 1.95
CACNB3-208ENST00000548279 DDX11Q96FC9 970 aa27.23■■□□□ 1.95
CACNB3-208ENST00000548279 RAD50Q92878 1312 aa27.22■■□□□ 1.95
CACNB3-208ENST00000548279 PDHBP11177 359 aa27.22■■□□□ 1.95
CACNB3-208ENST00000548279 HABP4Q5JVS0 413 aaKnown RBP27.22■■□□□ 1.95
CACNB3-208ENST00000548279 GPCPD1Q9NPB8 672 aa27.22■■□□□ 1.95
CACNB3-208ENST00000548279 NR2E3Q9Y5X4 410 aa27.22■■□□□ 1.95
CACNB3-208ENST00000548279 SMCHD1A6NHR9 2005 aa27.22■■□□□ 1.95
CACNB3-208ENST00000548279 PTH1RQ03431 593 aa27.21■■□□□ 1.95
CACNB3-208ENST00000548279 IMMTQ16891 758 aaKnown RBP27.21■■□□□ 1.95
CACNB3-208ENST00000548279 BTNL9Q6UXG8 535 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms