RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 PFKLP17858 780 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 GBP1P32455 592 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 KCNC1P48547 511 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 GALK1P51570 392 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 RAD51AP2Q09MP3 1159 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 MAP3K11Q16584 847 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 TMC6Q7Z403 805 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 IGDCC3Q8IVU1 814 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 USHBP1Q8N6Y0 703 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 JARID2Q92833 1246 aaPredicted RBP4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 TCTN2Q96GX1 697 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 HHIPL1Q96JK4 782 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 FOXP3Q9BZS1 431 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 CORINQ9Y5Q5 1042 aa4.5□□□□□ -1.69
DEPDC4-204ENST00000547823 MRC2Q9UBG0 1479 aa4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 A0A1W2PQ45 241 aaPredicted RBP4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 A0A1W2PQY0 241 aa4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 LMNB2Q03252 620 aa4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 CBX2Q14781 532 aaPredicted RBP4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 NR1I3Q14994 352 aa4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 TARBP2Q15633 366 aaKnown RBP4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 ERICH6Q7L0X2 663 aa4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 GATAD2BQ8WXI9 593 aa4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 REV1Q9UBZ9 1251 aa4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 KLHL3Q9UH77 587 aa4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 PCDHA5Q9Y5H7 936 aa4.49□□□□□ -1.69
DEPDC4-204ENST00000547823 TMEM82A0PJX8 343 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 RGS13O14921 159 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 BUB1BO60566 1050 aaPredicted RBP4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 HTR3BO95264 441 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 PWP1Q13610 501 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 RAB3GAP1Q15042 981 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 SYT8Q8NBV8 401 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 PHC3Q8NDX5 983 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 VWCEQ96DN2 955 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 ADAM7Q9H2U9 754 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 USP40Q9NVE5 1235 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 KLHL14Q9P2G3 628 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 ERCC6L2Q5T890 1561 aa4.48□□□□□ -1.69
DEPDC4-204ENST00000547823 FAM221AA4D161 298 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 FADS2P1A8MWK0 482 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 SYPP08247 313 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 ITGAEP38570 1179 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 CYP4F8P98187 520 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 RTP5Q14D33 572 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 TAF1CQ15572 869 aaPredicted RBP4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 VMACQ2NL98 169 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 BBS9Q3SYG4 887 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 HSF5Q4G112 596 aaPredicted RBP4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 UBXN11Q5T124 520 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 HHIPL2Q6UWX4 724 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 AEBP1Q8IUX7 1158 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 TNFRSF12AQ9NP84 129 aa4.47□□□□□ -1.69
DEPDC4-204ENST00000547823 ARAP1Q96P48 1450 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 SIGLEC6O43699 453 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 EFEMP2O95967 443 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 INSRRP14616 1297 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 CCNFP41002 786 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 MAPKAPK2P49137 400 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 SLURP1P55000 103 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 RBM10P98175 930 aaKnown RBP4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 CAMK2GQ13555 558 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 MPP2Q14168 576 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 PUM1Q14671 1186 aaKnown RBP eCLIP4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 ZC3H14Q6PJT7 736 aaKnown RBP4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 SLCO6A1Q86UG4 719 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 TP53I13Q8NBR0 393 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 KIF2CQ99661 725 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 PLCD4Q9BRC7 762 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 PRR13Q9NZ81 148 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 ACSL6Q9UKU0 697 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 GPR55Q9Y2T6 319 aaPredicted RBP4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 IRS2Q9Y4H2 1338 aa4.46□□□□□ -1.7
DEPDC4-204ENST00000547823 CHURC1-FNTBB4DL54 471 aa4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 SUPT5HO00267 1087 aaKnown RBP4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 FKTNO75072 461 aa4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 RAG1P15918 1043 aa4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 PRKCAP17252 672 aa4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 IGFBP6P24592 240 aaPredicted RBP4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 BMP8BP34820 402 aa4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 NBPF9Q3BBW0 867 aa4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 PLEKHN1Q494U1 663 aaPredicted RBP4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 BNC2Q6ZN30 1099 aaPredicted RBP4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 NUP43Q8NFH3 380 aa4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 RNF38Q9H0F5 515 aa4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 SRRDQ9UH36 339 aa4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 TLR6Q9Y2C9 796 aa4.45□□□□□ -1.7
DEPDC4-204ENST00000547823 NUDT19A8MXV4 375 aa4.44□□□□□ -1.7
DEPDC4-204ENST00000547823 FFAR3O14843 346 aa4.44□□□□□ -1.7
DEPDC4-204ENST00000547823 F13A1P00488 732 aa4.44□□□□□ -1.7
DEPDC4-204ENST00000547823 SDHBP21912 280 aa4.44□□□□□ -1.7
DEPDC4-204ENST00000547823 MAGEA10P43363 369 aaPredicted RBP4.44□□□□□ -1.7
DEPDC4-204ENST00000547823 NBPF12Q5TAG4 269 aaPredicted RBP4.44□□□□□ -1.7
DEPDC4-204ENST00000547823 RPTNQ6XPR3 784 aa4.44□□□□□ -1.7
DEPDC4-204ENST00000547823 REC114Q7Z4M0 266 aa4.44□□□□□ -1.7
DEPDC4-204ENST00000547823 GMIPQ9P107 970 aa4.44□□□□□ -1.7
DEPDC4-204ENST00000547823 ADAMTS20P59510 1910 aa4.44□□□□□ -1.7
DEPDC4-204ENST00000547823 BAZ1BQ9UIG0 1483 aaKnown RBP4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 ROBO2Q9HCK4 1378 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms