RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PLA2G6O60733 806 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 ZBED4O75132 1171 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 SLC25A27O95847 323 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 XRCC5P13010 732 aaKnown RBP22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 RGS2P41220 211 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 UBXN2AP68543 259 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 IKQ13123 557 aaPredicted RBP22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 MAP2K5Q13163 448 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 GRB14Q14449 540 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 CCDC96Q2M329 555 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 CYB5R4Q7L1T6 521 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 ENAHQ8N8S7 591 aaPredicted RBP22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 UBAC1Q9BSL1 405 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 SLC38A10Q9HBR0 1119 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 TNKSO95271 1327 aa22.01■■□□□ 1.11
PRPF40B-206ENST00000547764 KIAA0100Q14667 2235 aaKnown RBP22■■□□□ 1.11
PRPF40B-206ENST00000547764 POTEFA5A3E0 1075 aa22■■□□□ 1.11
PRPF40B-206ENST00000547764 STRNO43815 780 aa22■■□□□ 1.11
PRPF40B-206ENST00000547764 INHAP05111 366 aa22■■□□□ 1.11
PRPF40B-206ENST00000547764 PDHBP11177 359 aa22■■□□□ 1.11
PRPF40B-206ENST00000547764 CPXCR1Q8N123 301 aa22■■□□□ 1.11
PRPF40B-206ENST00000547764 NCOA7Q8NI08 942 aa22■■□□□ 1.11
PRPF40B-206ENST00000547764 TMEM106CQ9BVX2 250 aa22■■□□□ 1.11
PRPF40B-206ENST00000547764 TEX13BQ9BXU2 312 aa22■■□□□ 1.11
PRPF40B-206ENST00000547764 CTDP1Q9Y5B0 961 aaPredicted RBP22■■□□□ 1.11
PRPF40B-206ENST00000547764 SLC27A2O14975 620 aa21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 ATP2A1O14983 1001 aa21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 RGS19P49795 217 aa21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 NECTIN1Q15223 517 aa21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 TTBK2Q6IQ55 1244 aa21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 RALYLQ86SE5 291 aaKnown RBP21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 PNMA1Q8ND90 353 aa21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 TRIB2Q92519 343 aa21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 APBA2Q99767 749 aa21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 KAT14Q9H8E8 782 aa21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 RAVER2Q9HCJ3 691 aaKnown RBP21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 FRMPD2Q68DX3 1309 aaPredicted RBP21.99■■□□□ 1.11
PRPF40B-206ENST00000547764 HMGCRP04035 888 aa21.98■■□□□ 1.11
PRPF40B-206ENST00000547764 SNHG28P0DPA3 235 aa21.98■■□□□ 1.11
PRPF40B-206ENST00000547764 FDX1P10109 184 aa21.98■■□□□ 1.11
PRPF40B-206ENST00000547764 ADORA2AP29274 412 aa21.98■■□□□ 1.11
PRPF40B-206ENST00000547764 CREB3L3Q68CJ9 461 aa21.98■■□□□ 1.11
PRPF40B-206ENST00000547764 SNRNP48Q6IEG0 339 aaKnown RBP21.98■■□□□ 1.11
PRPF40B-206ENST00000547764 GPCPD1Q9NPB8 672 aa21.98■■□□□ 1.11
PRPF40B-206ENST00000547764 PRR12Q9ULL5 1215 aa21.98■■□□□ 1.11
PRPF40B-206ENST00000547764 RIPK3Q9Y572 518 aa21.98■■□□□ 1.11
PRPF40B-206ENST00000547764 HOXC6P09630 235 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 FCER1AP12319 257 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 CCL5P13501 91 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 COPB2P35606 906 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 SLC16A2P36021 539 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 OAZ1P54368 228 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 ZNF543Q08ER8 600 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 TRIM32Q13049 653 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 SEC23AQ15436 765 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 CCL14Q16627 93 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 BTNL9Q6UXG8 535 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 TRMT44Q8IYL2 757 aaKnown RBP21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 ABRAQ8N0Z2 381 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 UNC93B1Q9H1C4 597 aa21.97■■□□□ 1.11
PRPF40B-206ENST00000547764 BRCA2P51587 3418 aa21.96■■□□□ 1.11
PRPF40B-206ENST00000547764 ZKSCAN1P17029 563 aaPredicted RBP21.96■■□□□ 1.11
PRPF40B-206ENST00000547764 SLC4A3P48751 1232 aa21.96■■□□□ 1.11
PRPF40B-206ENST00000547764 SNAP25P60880 206 aa21.96■■□□□ 1.11
PRPF40B-206ENST00000547764 IFIT1BQ5T764 474 aaKnown RBP21.96■■□□□ 1.11
PRPF40B-206ENST00000547764 CHST3Q7LGC8 479 aa21.96■■□□□ 1.11
PRPF40B-206ENST00000547764 DPP9Q86TI2 863 aa21.96■■□□□ 1.11
PRPF40B-206ENST00000547764 MB21D2Q8IYB1 491 aaPredicted RBP21.96■■□□□ 1.11
PRPF40B-206ENST00000547764 NPLOC4Q8TAT6 608 aa21.96■■□□□ 1.11
PRPF40B-206ENST00000547764 RNF208Q9H0X6 261 aa21.96■■□□□ 1.11
PRPF40B-206ENST00000547764 IFIT3O14879 490 aaKnown RBP21.95■■□□□ 1.1
PRPF40B-206ENST00000547764 COBLO75128 1261 aa21.95■■□□□ 1.1
PRPF40B-206ENST00000547764 EN2P19622 333 aaPredicted RBP21.95■■□□□ 1.1
PRPF40B-206ENST00000547764 MMP19Q99542 508 aa21.95■■□□□ 1.1
PRPF40B-206ENST00000547764 FLRT1Q9NZU1 646 aa21.95■■□□□ 1.1
PRPF40B-206ENST00000547764 ZNF536O15090 1300 aa21.95■■□□□ 1.1
PRPF40B-206ENST00000547764 GOLGA8HP0CJ92 632 aa21.94■■□□□ 1.1
PRPF40B-206ENST00000547764 ANTXR2P58335 489 aa21.94■■□□□ 1.1
PRPF40B-206ENST00000547764 KCTD2Q14681 263 aa21.94■■□□□ 1.1
PRPF40B-206ENST00000547764 GPATCH4Q5T3I0 446 aaKnown RBP21.94■■□□□ 1.1
PRPF40B-206ENST00000547764 SYDE2Q5VT97 1194 aa21.94■■□□□ 1.1
PRPF40B-206ENST00000547764 AGBL1Q96MI9 1066 aa21.94■■□□□ 1.1
PRPF40B-206ENST00000547764 RBBP6Q7Z6E9 1792 aaKnown RBP21.94■■□□□ 1.1
PRPF40B-206ENST00000547764 ZNF236Q9UL36 1845 aa21.94■■□□□ 1.1
PRPF40B-206ENST00000547764 GJB1P08034 283 aa21.93■■□□□ 1.1
PRPF40B-206ENST00000547764 RNF20Q5VTR2 975 aa21.93■■□□□ 1.1
PRPF40B-206ENST00000547764 CCDC174Q6PII3 467 aa21.93■■□□□ 1.1
PRPF40B-206ENST00000547764 ERICH2A1L162 156 aa21.92■■□□□ 1.1
PRPF40B-206ENST00000547764 PGK2P07205 417 aa21.92■■□□□ 1.1
PRPF40B-206ENST00000547764 PRKAR2AP13861 404 aaKnown RBP21.92■■□□□ 1.1
PRPF40B-206ENST00000547764 SART3Q15020 963 aaKnown RBP21.92■■□□□ 1.1
PRPF40B-206ENST00000547764 MAP3K21Q5TCX8 1036 aa21.92■■□□□ 1.1
PRPF40B-206ENST00000547764 CHST13Q8NET6 341 aa21.92■■□□□ 1.1
PRPF40B-206ENST00000547764 RANBP17Q9H2T7 1088 aaKnown RBP21.92■■□□□ 1.1
PRPF40B-206ENST00000547764 SENP2Q9HC62 589 aa21.92■■□□□ 1.1
PRPF40B-206ENST00000547764 SLC5A4Q9NY91 659 aa21.92■■□□□ 1.1
PRPF40B-206ENST00000547764 RPTORQ8N122 1335 aa21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 ZNFX1Q9P2E3 1918 aaKnown RBP21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 CACNB2Q08289 660 aaPredicted RBP21.91■■□□□ 1.1
PRPF40B-206ENST00000547764 COL9A3Q14050 684 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms