RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 RCAN1P53805 252 aa19.31■□□□□ 0.68
LETMD1-210ENST00000547555 MDM2Q00987 491 aaPredicted RBP19.31■□□□□ 0.68
LETMD1-210ENST00000547555 TRDNQ13061 729 aa19.31■□□□□ 0.68
LETMD1-210ENST00000547555 NR1I3Q14994 352 aa19.31■□□□□ 0.68
LETMD1-210ENST00000547555 SHC4Q6S5L8 630 aa19.31■□□□□ 0.68
LETMD1-210ENST00000547555 SRLQ86TD4 932 aa19.31■□□□□ 0.68
LETMD1-210ENST00000547555 KRI1Q8N9T8 703 aaKnown RBP19.31■□□□□ 0.68
LETMD1-210ENST00000547555 CNNM3Q8NE01 707 aa19.31■□□□□ 0.68
LETMD1-210ENST00000547555 CTCFLQ8NI51 663 aaPredicted RBP19.31■□□□□ 0.68
LETMD1-210ENST00000547555 APPBP2Q92624 585 aa19.31■□□□□ 0.68
LETMD1-210ENST00000547555 KCNH3Q9ULD8 1083 aa19.31■□□□□ 0.68
LETMD1-210ENST00000547555 FOCADQ5VW36 1801 aa19.31■□□□□ 0.68
LETMD1-210ENST00000547555 ZNF532Q9HCE3 1301 aa19.31■□□□□ 0.68
LETMD1-210ENST00000547555 A0A1B0GTH6 734 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 POLR3GO15318 223 aaPredicted RBP19.3■□□□□ 0.68
LETMD1-210ENST00000547555 CYP7A1P22680 504 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 GUCY1B3Q02153 619 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 TRIM29Q14134 588 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 KIF4BQ2VIQ3 1234 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 BEND6Q5SZJ8 279 aaPredicted RBP19.3■□□□□ 0.68
LETMD1-210ENST00000547555 ADGRA1Q86SQ6 560 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 TAF1DQ9H5J8 278 aaPredicted RBP19.3■□□□□ 0.68
LETMD1-210ENST00000547555 FANCLQ9NW38 375 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 ANGEL1Q9UNK9 670 aaKnown RBP19.3■□□□□ 0.68
LETMD1-210ENST00000547555 CEP131Q9UPN4 1083 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 GPR75-ASB3A0A0A6YYF3 556 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 AKR1B15C9JRZ8 316 aaPredicted RBP19.3■□□□□ 0.68
LETMD1-210ENST00000547555 MYO1CO00159 1063 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 BIN1O00499 593 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 FANCGO15287 622 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 CHGBP05060 677 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 EPHX2P34913 555 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 APOBEC3HQ6NTF7 200 aaKnown RBP19.3■□□□□ 0.68
LETMD1-210ENST00000547555 RASGRP2Q7LDG7 609 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 SAMD7Q7Z3H4 446 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 SPATA20Q8TB22 786 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 TRPM4Q8TD43 1214 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 RPGRIP1Q96KN7 1286 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 BRMS1Q9HCU9 246 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 PCDHAC2Q9Y5I4 1007 aa19.3■□□□□ 0.68
LETMD1-210ENST00000547555 VEGFAP15692 232 aaPredicted RBP19.29■□□□□ 0.68
LETMD1-210ENST00000547555 GNL2Q13823 731 aaKnown RBP19.29■□□□□ 0.68
LETMD1-210ENST00000547555 TRIM14Q14142 442 aa19.29■□□□□ 0.68
LETMD1-210ENST00000547555 MORC3Q14149 939 aa19.29■□□□□ 0.68
LETMD1-210ENST00000547555 DLGAP5Q15398 846 aa19.29■□□□□ 0.68
LETMD1-210ENST00000547555 WDR93Q6P2C0 686 aa19.29■□□□□ 0.68
LETMD1-210ENST00000547555 SGMS1Q86VZ5 419 aa19.29■□□□□ 0.68
LETMD1-210ENST00000547555 METTL16Q86W50 562 aaKnown RBP19.29■□□□□ 0.68
LETMD1-210ENST00000547555 CNGA4Q8IV77 575 aa19.29■□□□□ 0.68
LETMD1-210ENST00000547555 NAP1L2Q9ULW6 460 aaPredicted RBP19.29■□□□□ 0.68
LETMD1-210ENST00000547555 L1RE1Q9UN81 338 aa19.29■□□□□ 0.68
LETMD1-210ENST00000547555 PCDHA5Q9Y5H7 936 aa19.29■□□□□ 0.68
LETMD1-210ENST00000547555 WNT10BO00744 389 aa19.28■□□□□ 0.68
LETMD1-210ENST00000547555 TBC1D10BQ4KMP7 808 aaPredicted RBP19.28■□□□□ 0.68
LETMD1-210ENST00000547555 HSP90B2PQ58FF3 399 aa19.28■□□□□ 0.68
LETMD1-210ENST00000547555 RILPL1Q5EBL4 403 aa19.28■□□□□ 0.68
LETMD1-210ENST00000547555 USP50Q70EL3 339 aaPredicted RBP19.28■□□□□ 0.68
LETMD1-210ENST00000547555 NEK11Q8NG66 645 aa19.28■□□□□ 0.68
LETMD1-210ENST00000547555 CCDC12Q8WUD4 166 aaPredicted RBP19.28■□□□□ 0.68
LETMD1-210ENST00000547555 PRMT6Q96LA8 375 aaPredicted RBP19.28■□□□□ 0.68
LETMD1-210ENST00000547555 WDR24Q96S15 920 aa19.28■□□□□ 0.68
LETMD1-210ENST00000547555 ALG1Q9BT22 464 aa19.28■□□□□ 0.68
LETMD1-210ENST00000547555 NMRK2Q9NPI5 230 aa19.28■□□□□ 0.68
LETMD1-210ENST00000547555 A0A087WWV3 80 aa19.27■□□□□ 0.68
LETMD1-210ENST00000547555 KIF28PB7ZC32 967 aa19.27■□□□□ 0.68
LETMD1-210ENST00000547555 ZNF213O14771 459 aa19.27■□□□□ 0.68
LETMD1-210ENST00000547555 SEC31AO94979 1220 aaKnown RBP19.27■□□□□ 0.68
LETMD1-210ENST00000547555 BTDP43251 543 aa19.27■□□□□ 0.68
LETMD1-210ENST00000547555 PLCD1P51178 756 aa19.27■□□□□ 0.68
LETMD1-210ENST00000547555 HIRAP54198 1017 aaPredicted RBP19.27■□□□□ 0.68
LETMD1-210ENST00000547555 PPP4CP60510 307 aa19.27■□□□□ 0.68
LETMD1-210ENST00000547555 KRT40Q6A162 431 aa19.27■□□□□ 0.68
LETMD1-210ENST00000547555 ZNF526Q8TF50 670 aaPredicted RBP19.27■□□□□ 0.68
LETMD1-210ENST00000547555 RRAGCQ9HB90 399 aa19.27■□□□□ 0.68
LETMD1-210ENST00000547555 INTS13Q9NVM9 706 aa19.27■□□□□ 0.68
LETMD1-210ENST00000547555 PTPREP23469 700 aa19.27■□□□□ 0.67
LETMD1-210ENST00000547555 YY1P25490 414 aa19.27■□□□□ 0.67
LETMD1-210ENST00000547555 LIFRP42702 1097 aa19.27■□□□□ 0.67
LETMD1-210ENST00000547555 TNNT3P45378 269 aaPredicted RBP19.27■□□□□ 0.67
LETMD1-210ENST00000547555 RBM5P52756 815 aaKnown RBP eCLIP19.27■□□□□ 0.67
LETMD1-210ENST00000547555 POSTNQ15063 836 aa19.27■□□□□ 0.67
LETMD1-210ENST00000547555 FILIP1LQ4L180 1135 aa19.27■□□□□ 0.67
LETMD1-210ENST00000547555 TMTC1Q8IUR5 882 aa19.27■□□□□ 0.67
LETMD1-210ENST00000547555 RUBCNQ92622 972 aa19.27■□□□□ 0.67
LETMD1-210ENST00000547555 ADGRG1Q9Y653 693 aa19.27■□□□□ 0.67
LETMD1-210ENST00000547555 POLR2AP24928 1970 aaKnown RBP19.26■□□□□ 0.67
LETMD1-210ENST00000547555 CTAGE9A4FU28 777 aa19.26■□□□□ 0.67
LETMD1-210ENST00000547555 A6NNZ2 444 aa19.26■□□□□ 0.67
LETMD1-210ENST00000547555 BMP15O95972 392 aa19.26■□□□□ 0.67
LETMD1-210ENST00000547555 FGAP02671 866 aa19.26■□□□□ 0.67
LETMD1-210ENST00000547555 MAGEA9P43362 315 aa19.26■□□□□ 0.67
LETMD1-210ENST00000547555 SEMA3FQ13275 785 aa19.26■□□□□ 0.67
LETMD1-210ENST00000547555 SAFBQ15424 915 aaKnown RBP eCLIP19.26■□□□□ 0.67
LETMD1-210ENST00000547555 NBPF9Q3BBW0 867 aa19.26■□□□□ 0.67
LETMD1-210ENST00000547555 TUBB8Q3ZCM7 444 aa19.26■□□□□ 0.67
LETMD1-210ENST00000547555 MAP9Q49MG5 647 aa19.26■□□□□ 0.67
LETMD1-210ENST00000547555 PNMA8AQ86V59 439 aaPredicted RBP19.26■□□□□ 0.67
LETMD1-210ENST00000547555 PPFIBP1Q86W92 1011 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms