RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 MAGEC2Q9UBF1 373 aaPredicted RBP13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 CTNND2Q9UQB3 1225 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 C15orf41Q9Y2V0 281 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 ZNF233A6NK53 670 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 PPP6R2O75170 966 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 PAFAH1B1P43034 410 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 PROSER3Q2NL68 480 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 GKAP1Q5VSY0 366 aaPredicted RBP13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 USP49Q70CQ1 688 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 PROCA1Q8NCQ7 364 aaPredicted RBP13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 NCOA7Q8NI08 942 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 HAUS4Q9H6D7 363 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 KDRP35968 1356 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 ECEL1O95672 775 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 IFFO1Q0D2I5 559 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 PLCB4Q15147 1175 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 TBC1D25Q3MII6 688 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 XAGE3Q8WTP9 111 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 PRCCQ92733 491 aaPredicted RBP13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 TSGA10Q9BZW7 698 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 SEC31BQ9NQW1 1179 aa13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 ADD3Q9UEY8 706 aaKnown RBP13.26□□□□□ -0.29
RBFOX1-208ENST00000547372 ALKQ9UM73 1620 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 EVI5O60447 810 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 KLHL23Q8NBE8 558 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 SPATA4Q8NEY3 305 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 PANK4Q9NVE7 773 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 DBNLQ9UJU6 430 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 LUC7L2Q9Y383 392 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 NRKQ7Z2Y5 1582 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 ITSN1Q15811 1721 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 RIMS1Q86UR5 1692 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 ICA1Q05084 483 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 RRAGBQ5VZM2 374 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 NFRKBQ6P4R8 1299 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 TTLL7Q6ZT98 887 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 KRI1Q8N9T8 703 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 AGAP11Q8TF27 550 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 EZH1Q92800 747 aaPredicted RBP13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 RPGRIP1Q96KN7 1286 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 STIM2Q9P246 746 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 UBE2Q2LH0YL09 131 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 IFIT3O14879 490 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 PLCD1P51178 756 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 SPATA1Q5VX52 437 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 CDCA2Q69YH5 1023 aaPredicted RBP13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 KRT40Q6A162 431 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 CCDC51Q96ER9 411 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 CTAGE1Q96RT6 745 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 OSBPL1AQ9BXW6 950 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 BSDC1Q9NW68 430 aaPredicted RBP13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 REXO2Q9Y3B8 237 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-208ENST00000547372 SIGLEC1Q9BZZ2 1709 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 NCK2O43639 380 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 PCK1P35558 622 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 KIF5AQ12840 1032 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 MAP3K12Q12852 859 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 TNNI3KQ59H18 835 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 KDM7AQ6ZMT4 941 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 OR8K1Q8NGG5 319 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 GOPCQ9HD26 462 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 NOP53Q9NZM5 478 aaKnown RBP13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 SLC12A7Q9Y666 1083 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 FPGT-TNNI3KV9GXZ4 949 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 KIF5BP33176 963 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 PDCD2Q16342 344 aaPredicted RBP13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 HHATQ5VTY9 493 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 SPICE1Q8N0Z3 855 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 DYDC1Q8WWB3 177 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 LRRC59Q96AG4 307 aaKnown RBP13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 MS4A14Q96JA4 679 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 UBAC1Q9BSL1 405 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 PLAAQ9Y263 795 aa13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 ATXN2Q99700 1313 aaKnown RBP13.24□□□□□ -0.29
RBFOX1-208ENST00000547372 PRAMEF22A3QJZ6 481 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 TRIM21P19474 475 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 PTPAQ15257 358 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 TRADDQ15628 312 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 TMEM67Q5HYA8 995 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 KRT26Q7Z3Y9 468 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 MAB21L3Q8N8X9 362 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 ATP6V1G3Q96LB4 118 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 FAM210AQ96ND0 272 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 ZNF570Q96NI8 536 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 BLZF1Q9H2G9 400 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 TTC26A0AVF1 554 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 SMIM23A6NLE4 172 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 PSMD14O00487 310 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 PRPHP41219 470 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 SCNN1BP51168 640 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 SSRP1Q08945 709 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 KRT31Q15323 416 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 SPA17Q15506 151 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 TAF11Q15544 211 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 KIF2BQ8N4N8 673 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 PPP1R12CQ9BZL4 782 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms