RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 HNRNPLLQ8WVV9 542 aaKnown RBP16.48■□□□□ 0.23
LETMD1-209ENST00000547318 NELFBQ8WX92 580 aa16.48■□□□□ 0.23
LETMD1-209ENST00000547318 ABHD10Q9NUJ1 306 aa16.48■□□□□ 0.23
LETMD1-209ENST00000547318 CTAGE9A4FU28 777 aa16.47■□□□□ 0.23
LETMD1-209ENST00000547318 CASP14P31944 242 aa16.47■□□□□ 0.23
LETMD1-209ENST00000547318 WHAMMP3Q1A5X7 153 aa16.47■□□□□ 0.23
LETMD1-209ENST00000547318 TBC1D9BQ66K14 1250 aa16.47■□□□□ 0.23
LETMD1-209ENST00000547318 ZNF662Q6ZS27 426 aa16.47■□□□□ 0.23
LETMD1-209ENST00000547318 NBPF5PQ86XG9 351 aaPredicted RBP16.47■□□□□ 0.23
LETMD1-209ENST00000547318 MRPL44Q9H9J2 332 aaKnown RBP16.47■□□□□ 0.23
LETMD1-209ENST00000547318 MCM9Q9NXL9 1143 aa16.47■□□□□ 0.23
LETMD1-209ENST00000547318 WNT7AO00755 349 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 NPHP1O15259 732 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 PIP4K2BP78356 416 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 FAM47AQ5JRC9 791 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 CC2D1AQ6P1N0 951 aaPredicted RBP16.46■□□□□ 0.23
LETMD1-209ENST00000547318 ADSSL1Q8N142 457 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 RETREG2Q8NC44 543 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 TAF1P21675 1872 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 KDM4FA0A1W2PPD8 638 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 hCG_1642624A0A1W2PR95 340 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 hCG_1984214I3L0E3 225 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 PSMA7O14818 248 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 RHOBTB3O94955 611 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 LDHBP07195 334 aaKnown RBP16.46■□□□□ 0.23
LETMD1-209ENST00000547318 PRDX5P30044 214 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 USP5P45974 858 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 TFAP4Q01664 338 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 COBLL1Q53SF7 1204 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 FAM114A1Q8IWE2 563 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 ZNF713Q8N859 430 aaPredicted RBP16.46■□□□□ 0.23
LETMD1-209ENST00000547318 DHTKD1Q96HY7 919 aaPredicted RBP16.46■□□□□ 0.23
LETMD1-209ENST00000547318 DESI2Q9BSY9 194 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 NUP58Q9BVL2 599 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 SPZ1Q9BXG8 430 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 BARHL2Q9NY43 387 aa16.46■□□□□ 0.23
LETMD1-209ENST00000547318 TNRC6CQ9HCJ0 1690 aaKnown RBP16.45■□□□□ 0.22
LETMD1-209ENST00000547318 ZPR1O75312 459 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 CHMP4BP1P59074 171 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 IL17AQ16552 155 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 KRT25Q7Z3Z0 450 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 UBXN6Q9BZV1 441 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 GBP3Q9H0R5 595 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 KBTBD4Q9NVX7 518 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 BICDL2A1A5D9 508 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 LGALS16A8MUM7 142 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 SMIM22K7EJ46 135 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 ERLIN1O75477 346 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 PLCG2P16885 1265 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 UBA7P41226 1012 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 FXR1P51114 621 aaKnown RBP eCLIP16.45■□□□□ 0.22
LETMD1-209ENST00000547318 KARSQ15046 597 aaKnown RBP16.45■□□□□ 0.22
LETMD1-209ENST00000547318 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
LETMD1-209ENST00000547318 EHBP1Q8NDI1 1231 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 NUP88Q99567 741 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-209ENST00000547318 MTRQ99707 1265 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 NAPGQ99747 312 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-209ENST00000547318 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
LETMD1-209ENST00000547318 MAGEC2Q9UBF1 373 aaPredicted RBP16.45■□□□□ 0.22
LETMD1-209ENST00000547318 SBF2Q86WG5 1849 aa16.44■□□□□ 0.22
LETMD1-209ENST00000547318 PALM3A6NDB9 673 aaPredicted RBP16.44■□□□□ 0.22
LETMD1-209ENST00000547318 GPS2Q13227 327 aa16.44■□□□□ 0.22
LETMD1-209ENST00000547318 ZNF444Q8N0Y2 327 aaPredicted RBP16.44■□□□□ 0.22
LETMD1-209ENST00000547318 MSANTD4Q8NCY6 345 aa16.44■□□□□ 0.22
LETMD1-209ENST00000547318 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
LETMD1-209ENST00000547318 NHSQ6T4R5 1651 aa16.44■□□□□ 0.22
LETMD1-209ENST00000547318 NMT2O60551 498 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 TSPY3P0CV98 308 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 TSPY8P0CW00 308 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 GNA11P29992 359 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 PLA2G4AP47712 749 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 DNM2P50570 870 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 AMPD3Q01432 767 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 MTF1Q14872 753 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 PTPN21Q16825 1174 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 ZNF804AQ7Z570 1209 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 SMYD4Q8IYR2 804 aaPredicted RBP16.43■□□□□ 0.22
LETMD1-209ENST00000547318 GIMAP8Q8ND71 665 aaPredicted RBP16.43■□□□□ 0.22
LETMD1-209ENST00000547318 OR8K1Q8NGG5 319 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 BLZF1Q9H2G9 400 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 LZTFL1Q9NQ48 299 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 IL17RBQ9NRM6 502 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 RAB21Q9UL25 225 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 PCDHA6Q9UN73 950 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 PCDHA8Q9Y5H6 950 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 DDX60LQ5H9U9 1706 aaKnown RBP16.43■□□□□ 0.22
LETMD1-209ENST00000547318 PARP1P09874 1014 aaKnown RBP16.43■□□□□ 0.22
LETMD1-209ENST00000547318 CYP2D6P10635 497 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 CASP1P29466 404 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 CCT6AP40227 531 aaKnown RBP16.43■□□□□ 0.22
LETMD1-209ENST00000547318 PRCPP42785 496 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
LETMD1-209ENST00000547318 DNAJC7Q99615 494 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 PARD6BQ9BYG5 372 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 ZMYND12Q9H0C1 365 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 HAUS4Q9H6D7 363 aa16.43■□□□□ 0.22
LETMD1-209ENST00000547318 ESYT2A0FGR8 921 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 STXBP3O00186 592 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 KLRK1P26718 216 aa16.42■□□□□ 0.22
LETMD1-209ENST00000547318 KRT9P35527 623 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms