RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	NPM2	Q86SE8	214 aa	Known RBP	7.2	□□□□□ -1.26
LGR5-204	ENST00000547310	CPLX3	Q8WVH0	158 aa		7.2	□□□□□ -1.26
LGR5-204	ENST00000547310	KCNN1	Q92952	543 aa		7.2	□□□□□ -1.26
LGR5-204	ENST00000547310	SLC26A8	Q96RN1	970 aa		7.2	□□□□□ -1.26
LGR5-204	ENST00000547310	SUCO	Q9UBS9	1254 aa	Known RBP	7.2	□□□□□ -1.26
LGR5-204	ENST00000547310	SLC12A7	Q9Y666	1083 aa		7.2	□□□□□ -1.26
LGR5-204	ENST00000547310	PMS1	P54277	932 aa	Known RBP	7.19	□□□□□ -1.26
LGR5-204	ENST00000547310	UNC5A	Q6ZN44	842 aa		7.19	□□□□□ -1.26
LGR5-204	ENST00000547310	RUFY4	Q6ZNE9	571 aa		7.19	□□□□□ -1.26
LGR5-204	ENST00000547310	ENOX1	Q8TC92	643 aa	Known RBP	7.19	□□□□□ -1.26
LGR5-204	ENST00000547310	HSPA12B	Q96MM6	686 aa		7.19	□□□□□ -1.26
LGR5-204	ENST00000547310	SLC6A18	Q96N87	628 aa		7.19	□□□□□ -1.26
LGR5-204	ENST00000547310	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.19	□□□□□ -1.26
LGR5-204	ENST00000547310	C19orf73	Q9NVV2	129 aa		7.19	□□□□□ -1.26
LGR5-204	ENST00000547310	CHMP4BP1	P59074	171 aa		7.18	□□□□□ -1.26
LGR5-204	ENST00000547310	NBPF9	Q3BBW0	867 aa		7.18	□□□□□ -1.26
LGR5-204	ENST00000547310	NAALADL2	Q58DX5	795 aa		7.18	□□□□□ -1.26
LGR5-204	ENST00000547310	MCF2L2	Q86YR7	1114 aa		7.18	□□□□□ -1.26
LGR5-204	ENST00000547310	SMARCC1	Q92922	1105 aa	Predicted RBP	7.18	□□□□□ -1.26
LGR5-204	ENST00000547310	TRIT1	Q9H3H1	467 aa	Known RBP	7.18	□□□□□ -1.26
LGR5-204	ENST00000547310	PRR13	Q9NZ81	148 aa		7.18	□□□□□ -1.26
LGR5-204	ENST00000547310	ZNF214	Q9UL59	606 aa	Predicted RBP	7.18	□□□□□ -1.26
LGR5-204	ENST00000547310		A0A1W2PQH9	124 aa		7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	LRRN2	O75325	713 aa		7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	ZYX	Q15942	572 aa	Known RBP	7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	GAB4	Q2WGN9	574 aa		7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	BBS9	Q3SYG4	887 aa		7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	ANKRD39	Q53RE8	183 aa		7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	TMPRSS7	Q7RTY8	843 aa		7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	TTC6	Q86TZ1	520 aa		7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	FAM169B	Q8N8A8	192 aa		7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	MARCH10	Q8NA82	808 aa	Predicted RBP	7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	PHAX	Q9H814	394 aa	Known RBP	7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	KCNK12	Q9HB15	430 aa		7.17	□□□□□ -1.26
LGR5-204	ENST00000547310	SSB	P05455	408 aa	Known RBP eCLIP	7.16	□□□□□ -1.26
LGR5-204	ENST00000547310	TNNI3K	Q59H18	835 aa		7.16	□□□□□ -1.26
LGR5-204	ENST00000547310	CDKAL1	Q5VV42	579 aa		7.16	□□□□□ -1.26
LGR5-204	ENST00000547310	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.16	□□□□□ -1.26
LGR5-204	ENST00000547310	GPATCH2	Q9NW75	528 aa		7.16	□□□□□ -1.26
LGR5-204	ENST00000547310	LTBP3	Q9NS15	1303 aa		7.16	□□□□□ -1.26
LGR5-204	ENST00000547310	DNAJA1	P31689	397 aa	Known RBP	7.15	□□□□□ -1.26
LGR5-204	ENST00000547310	ZXDC	Q2QGD7	858 aa	Predicted RBP	7.15	□□□□□ -1.26
LGR5-204	ENST00000547310	UBE2F	Q969M7	185 aa		7.15	□□□□□ -1.26
LGR5-204	ENST00000547310		H3BS24	57 aa		7.14	□□□□□ -1.27
LGR5-204	ENST00000547310	AUH	Q13825	339 aa	Known RBP	7.14	□□□□□ -1.27
LGR5-204	ENST00000547310	PPFIBP1	Q86W92	1011 aa		7.14	□□□□□ -1.27
LGR5-204	ENST00000547310	DAGLB	Q8NCG7	672 aa		7.14	□□□□□ -1.27
LGR5-204	ENST00000547310	SYTL5	Q8TDW5	730 aa	Predicted RBP	7.14	□□□□□ -1.27
LGR5-204	ENST00000547310	ANAPC16	Q96DE5	110 aa		7.14	□□□□□ -1.27
LGR5-204	ENST00000547310	ATP13A1	Q9HD20	1204 aa		7.14	□□□□□ -1.27
LGR5-204	ENST00000547310	PRKAG3	Q9UGI9	489 aa		7.14	□□□□□ -1.27
LGR5-204	ENST00000547310		C9IYK1	514 aa		7.13	□□□□□ -1.27
LGR5-204	ENST00000547310	RBAK-RBAKDN	I3L0D1	243 aa		7.13	□□□□□ -1.27
LGR5-204	ENST00000547310	NMI	Q13287	307 aa	Predicted RBP	7.13	□□□□□ -1.27
LGR5-204	ENST00000547310	C7orf61	Q8IZ16	206 aa		7.13	□□□□□ -1.27
LGR5-204	ENST00000547310	CCDC120	Q96HB5	630 aa		7.13	□□□□□ -1.27
LGR5-204	ENST00000547310	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.13	□□□□□ -1.27
LGR5-204	ENST00000547310	ZSWIM5	Q9P217	1185 aa		7.13	□□□□□ -1.27
LGR5-204	ENST00000547310	SHISA3	A0PJX4	238 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	SHOX	O15266	292 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	SUV39H1	O43463	412 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	SIGLEC6	O43699	453 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	ESR1	P03372	595 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	CELA3B	P08861	270 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	TPP2	P29144	1249 aa	Predicted RBP	7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	ETFB	P38117	255 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	ZNF655	Q8N720	491 aa	Predicted RBP	7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	ARMC5	Q96C12	935 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	ZNF512B	Q96KM6	892 aa	Predicted RBP	7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	HDAC8	Q9BY41	377 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	PRDM14	Q9GZV8	571 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	MKRN2	Q9H000	416 aa	Known RBP	7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	ZNF408	Q9H9D4	720 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	PCDHB12	Q9Y5F1	795 aa		7.12	□□□□□ -1.27
LGR5-204	ENST00000547310	SMAD7	O15105	426 aa	Known RBP	7.11	□□□□□ -1.27
LGR5-204	ENST00000547310	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.11	□□□□□ -1.27
LGR5-204	ENST00000547310	KLHL6	Q8WZ60	621 aa		7.11	□□□□□ -1.27
LGR5-204	ENST00000547310	ZNF281	Q9Y2X9	895 aa		7.11	□□□□□ -1.27
LGR5-204	ENST00000547310	MRVI1	Q9Y6F6	885 aa		7.11	□□□□□ -1.27
LGR5-204	ENST00000547310		A0A087WZG4	1122 aa		7.1	□□□□□ -1.27
LGR5-204	ENST00000547310	SLC7A5	Q01650	507 aa		7.1	□□□□□ -1.27
LGR5-204	ENST00000547310	SNW1	Q13573	536 aa	Known RBP	7.1	□□□□□ -1.27
LGR5-204	ENST00000547310	PPP2R5E	Q16537	467 aa		7.1	□□□□□ -1.27
LGR5-204	ENST00000547310	ERICH6B	Q5W0A0	696 aa		7.1	□□□□□ -1.27
LGR5-204	ENST00000547310	TMC3	Q7Z5M5	1100 aa		7.1	□□□□□ -1.27
LGR5-204	ENST00000547310	CCDC144CP	Q8IYA2	1237 aa		7.1	□□□□□ -1.27
LGR5-204	ENST00000547310	FAM86C2P	A6NEL3	165 aa		7.09	□□□□□ -1.27
LGR5-204	ENST00000547310	CD247	P20963	164 aa		7.09	□□□□□ -1.27
LGR5-204	ENST00000547310	ZNF143	P52747	638 aa	Predicted RBP	7.09	□□□□□ -1.27
LGR5-204	ENST00000547310	NCAPH	Q15003	741 aa		7.09	□□□□□ -1.27
LGR5-204	ENST00000547310	CLEC16A	Q2KHT3	1053 aa		7.09	□□□□□ -1.27
LGR5-204	ENST00000547310	GNPTAB	Q3T906	1256 aa		7.09	□□□□□ -1.27
LGR5-204	ENST00000547310	XYLT2	Q9H1B5	865 aa		7.09	□□□□□ -1.27
LGR5-204	ENST00000547310	CARS2	Q9HA77	564 aa	Known RBP	7.09	□□□□□ -1.27
LGR5-204	ENST00000547310	ACTR10	Q9NZ32	417 aa		7.09	□□□□□ -1.27
LGR5-204	ENST00000547310	DUSP13	Q9UII6	198 aa		7.09	□□□□□ -1.27
LGR5-204	ENST00000547310	WASH4P	A8MWX3	477 aa		7.08	□□□□□ -1.28
LGR5-204	ENST00000547310	CBFA2T2	O43439	604 aa		7.08	□□□□□ -1.28
LGR5-204	ENST00000547310	KLF4	O43474	513 aa		7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms