RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 CYP2C19P33261 490 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 TFAP4Q01664 338 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 NMIQ13287 307 aaPredicted RBP12.26□□□□□ -0.45
BEST3-208ENST00000547208 MCMDC2Q4G0Z9 681 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 OLFML2BQ68BL8 750 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 NECAB2Q7Z6G3 386 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 NCAPG2Q86XI2 1143 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 RIOX2Q8IUF8 465 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 LRRC47Q8N1G4 583 aaKnown RBP12.26□□□□□ -0.45
BEST3-208ENST00000547208 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 SLF1Q9BQI6 1058 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 IL17RBQ9NRM6 502 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 PFASO15067 1338 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 ZMYM6O95789 1325 aa12.26□□□□□ -0.45
BEST3-208ENST00000547208 RAD21O60216 631 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 SLC25A27O95847 323 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 FGAP02671 866 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 SLC3A2P08195 630 aaKnown RBP12.25□□□□□ -0.45
BEST3-208ENST00000547208 HSPD1P10809 573 aaKnown RBP12.25□□□□□ -0.45
BEST3-208ENST00000547208 COL6A1P12109 1028 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 STAT3P40763 770 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 NOVP48745 357 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 MFSD14CQ5VZR4 134 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 Q7L0L9 218 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 DPP9Q86TI2 863 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 NBPF3Q9H094 633 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 LRRC37A2A6NM11 1700 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 LTBP2Q14767 1821 aa12.25□□□□□ -0.45
BEST3-208ENST00000547208 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 ATP2A1O14983 1001 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 ORC4O43929 436 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 NMT2O60551 498 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 FCER1AP12319 257 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 SDSP20132 328 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 CCDC171Q6TFL3 1326 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 PRPF38AQ8NAV1 312 aaKnown RBP12.24□□□□□ -0.45
BEST3-208ENST00000547208 RILPL2Q969X0 211 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 MAML3Q96JK9 1138 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 C11orf49Q9H6J7 331 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 DDX20Q9UHI6 824 aaKnown RBP12.24□□□□□ -0.45
BEST3-208ENST00000547208 RIPK3Q9Y572 518 aa12.24□□□□□ -0.45
BEST3-208ENST00000547208 EVI5O60447 810 aa12.23□□□□□ -0.45
BEST3-208ENST00000547208 ZNF792Q3KQV3 632 aa12.23□□□□□ -0.45
BEST3-208ENST00000547208 SLFN13Q68D06 897 aa12.23□□□□□ -0.45
BEST3-208ENST00000547208 RASGRP2Q7LDG7 609 aa12.23□□□□□ -0.45
BEST3-208ENST00000547208 GMCL1Q96IK5 515 aa12.23□□□□□ -0.45
BEST3-208ENST00000547208 MMP19Q99542 508 aa12.23□□□□□ -0.45
BEST3-208ENST00000547208 TEX13BQ9BXU2 312 aa12.23□□□□□ -0.45
BEST3-208ENST00000547208 SLC38A10Q9HBR0 1119 aa12.23□□□□□ -0.45
BEST3-208ENST00000547208 MYH6P13533 1939 aa12.23□□□□□ -0.45
BEST3-208ENST00000547208 TSPY2A6NKD2 308 aa12.22□□□□□ -0.45
BEST3-208ENST00000547208 PGK2P07205 417 aa12.22□□□□□ -0.45
BEST3-208ENST00000547208 BMP3P12645 472 aa12.22□□□□□ -0.45
BEST3-208ENST00000547208 PDE4AP27815 886 aa12.22□□□□□ -0.45
BEST3-208ENST00000547208 COPB2P35606 906 aa12.22□□□□□ -0.45
BEST3-208ENST00000547208 SNRNP48Q6IEG0 339 aaKnown RBP12.22□□□□□ -0.45
BEST3-208ENST00000547208 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.22□□□□□ -0.45
BEST3-208ENST00000547208 SLC5A4Q9NY91 659 aa12.22□□□□□ -0.45
BEST3-208ENST00000547208 FEM1BQ9UK73 627 aa12.22□□□□□ -0.45
BEST3-208ENST00000547208 DIS3Q9Y2L1 958 aaKnown RBP12.22□□□□□ -0.45
BEST3-208ENST00000547208 NR2E3Q9Y5X4 410 aa12.22□□□□□ -0.45
BEST3-208ENST00000547208 ZNF536O15090 1300 aa12.21□□□□□ -0.45
BEST3-208ENST00000547208 DNAJC25-GNG10A0A024R161 153 aa12.21□□□□□ -0.45
BEST3-208ENST00000547208 MSCO60682 206 aa12.21□□□□□ -0.45
BEST3-208ENST00000547208 CNGA1P29973 690 aa12.21□□□□□ -0.45
BEST3-208ENST00000547208 KCTD2Q14681 263 aa12.21□□□□□ -0.45
BEST3-208ENST00000547208 PRAMEF19Q5SWL8 479 aa12.21□□□□□ -0.45
BEST3-208ENST00000547208 KIFC2Q96AC6 838 aa12.21□□□□□ -0.45
BEST3-208ENST00000547208 STX8Q9UNK0 236 aa12.21□□□□□ -0.45
BEST3-208ENST00000547208 UNC80Q8N2C7 3258 aa12.21□□□□□ -0.46
BEST3-208ENST00000547208 SEPT4O43236 478 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
BEST3-208ENST00000547208 PLA2G6O60733 806 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 MCCP23508 829 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 OAZ1P54368 228 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 HAND2P61296 217 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 IRX6P78412 446 aaPredicted RBP12.2□□□□□ -0.46
BEST3-208ENST00000547208 LRRC26Q2I0M4 334 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 PPP4R3BQ5MIZ7 849 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 CWC27Q6UX04 472 aaKnown RBP12.2□□□□□ -0.46
BEST3-208ENST00000547208 TBC1D10CQ8IV04 446 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 C7orf61Q8IZ16 206 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 CPXCR1Q8N123 301 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 FGD4Q96M96 766 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 TINF2Q9BSI4 451 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 IL25Q9H293 177 aa12.2□□□□□ -0.46
BEST3-208ENST00000547208 RAVER2Q9HCJ3 691 aaKnown RBP12.2□□□□□ -0.46
BEST3-208ENST00000547208 TMEM232C9JQI7 657 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 DNM1LO00429 736 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 ZBED4O75132 1171 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 GSPT1P15170 499 aaKnown RBP12.19□□□□□ -0.46
BEST3-208ENST00000547208 TAL1P17542 331 aaPredicted RBP12.19□□□□□ -0.46
BEST3-208ENST00000547208 SLC1A4P43007 532 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 STAT2P52630 851 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 AKNAD1Q5T1N1 836 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 ANO1Q5XXA6 986 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 RCSD1Q6JBY9 416 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 KCTD1Q719H9 257 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 STAG1Q8WVM7 1258 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 CHMP4CQ96CF2 233 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms