RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 TRIM29Q14134 588 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 KIAA1755Q5JYT7 1200 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 SYDE2Q5VT97 1194 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 RASGRP2Q7LDG7 609 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 SAPCD2Q86UD0 394 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 ADGRF4Q8IZF3 695 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 ZNF713Q8N859 430 aaPredicted RBP18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 CNKSR2Q8WXI2 1034 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 HHIPL1Q96JK4 782 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 TANGO6Q9C0B7 1094 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 UBA5Q9GZZ9 404 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 RPAP3Q9H6T3 665 aaPredicted RBP18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 TLL2Q9Y6L7 1015 aa18.32■□□□□ 0.52
TRAFD1-203ENST00000547063 USP17L15C9J2P7 530 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 USP17L13C9JLJ4 530 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 USP17L11C9JVI0 530 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 USP17L18D6R9N7 530 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 USP17L22D6RA61 530 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 USP17L17D6RBQ6 530 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 USP17L19D6RCP7 530 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 USP17L20D6RJB6 530 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 CETPP11597 493 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 FDPSP14324 419 aaKnown RBP18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 NUCB2P80303 420 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 USP17L24Q0WX57 530 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 TTBK2Q6IQ55 1244 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 PRPF38AQ8NAV1 312 aaKnown RBP18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 SLF1Q9BQI6 1058 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 ALG1Q9BT22 464 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 PNMA2Q9UL42 364 aa18.31■□□□□ 0.52
TRAFD1-203ENST00000547063 LOC285556D6RIA3 1793 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 MYPNQ86TC9 1320 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 PNMA6FA0A0J9YX94 578 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 ZBTB5O15062 677 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 CYTH3O43739 400 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 SCG2P13521 617 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 SLC16A2P36021 539 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 PFKFB3Q16875 520 aaPredicted RBP18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 SPRYD7Q5W111 196 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 RGMBQ6NW40 437 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 GADL1Q6ZQY3 521 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 C8orf76Q96K31 380 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 JMJD4Q9H9V9 463 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 VAT1LQ9HCJ6 419 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 SH3GLB2Q9NR46 395 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
TRAFD1-203ENST00000547063 H3BQV1 296 aa18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 FLOT1O75955 427 aa18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 DDIT3P35638 169 aa18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 ZNF157P51786 506 aaPredicted RBP18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 IFFO2Q5TF58 517 aa18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 CCDC12Q8WUD4 166 aaPredicted RBP18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 CCDC102AQ96A19 550 aa18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 MTMR8Q96EF0 704 aa18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 HOXC10Q9NYD6 342 aa18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 PRR12Q9ULL5 1215 aa18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 ABT1Q9ULW3 272 aaKnown RBP18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 AGTPBP1Q9UPW5 1226 aa18.29■□□□□ 0.52
TRAFD1-203ENST00000547063 BAZ2BQ9UIF8 2168 aaKnown RBP18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 STX6O43752 255 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 PPFIA3O75145 1194 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 SYT1P21579 422 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 COG2Q14746 738 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 PKN1Q16512 942 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 CATSPERGQ6ZRH7 1159 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 HOMER1Q86YM7 354 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 CCDC148Q8NFR7 591 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 KIFC2Q96AC6 838 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 PIGSQ96S52 555 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 CPVLQ9H3G5 476 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 PPP1R9AQ9ULJ8 1098 aa18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 CTDP1Q9Y5B0 961 aaPredicted RBP18.28■□□□□ 0.52
TRAFD1-203ENST00000547063 WDR33Q9C0J8 1336 aaKnown RBP18.27■□□□□ 0.52
TRAFD1-203ENST00000547063 GJA5P36382 358 aa18.27■□□□□ 0.52
TRAFD1-203ENST00000547063 CDC37Q16543 378 aaPredicted RBP18.27■□□□□ 0.52
TRAFD1-203ENST00000547063 SLC35G1Q2M3R5 365 aa18.27■□□□□ 0.52
TRAFD1-203ENST00000547063 FBXO18Q8NFZ0 1043 aa18.27■□□□□ 0.52
TRAFD1-203ENST00000547063 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
TRAFD1-203ENST00000547063 ZBED4O75132 1171 aa18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 OSBPP22059 807 aa18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 IRX3P78415 501 aaPredicted RBP18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 SAFBQ15424 915 aaKnown RBP eCLIP18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 PPP1R18Q6NYC8 613 aa18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 HEATR3Q7Z4Q2 680 aa18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 RASAL3Q86YV0 1011 aa18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 PIBF1Q8WXW3 757 aa18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 AMNQ9BXJ7 453 aa18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 RANBP17Q9H2T7 1088 aaKnown RBP18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 BRMS1Q9HCU9 246 aa18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 BARHL2Q9NY43 387 aa18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 PNMA3Q9UL41 463 aa18.26■□□□□ 0.51
TRAFD1-203ENST00000547063 CCL15-CCL14A0A0B4J2E2 113 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 hCG_1642624A0A1W2PR95 340 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 VPS37CA5D8V6 355 aaPredicted RBP18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 MANSC4A6NHS7 340 aaPredicted RBP18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 SLC10A3P09131 477 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 CALML3P27482 149 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 DSG3P32926 999 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 APLP1P51693 650 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms