RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 STAT3P40763 770 aa16.93■□□□□ 0.3
DDX54-203ENST00000546869 ANAPC15P60006 121 aa16.93■□□□□ 0.3
DDX54-203ENST00000546869 TROAPQ12815 778 aa16.93■□□□□ 0.3
DDX54-203ENST00000546869 COL9A3Q14050 684 aaPredicted RBP16.93■□□□□ 0.3
DDX54-203ENST00000546869 C8orf34Q49A92 452 aa16.93■□□□□ 0.3
DDX54-203ENST00000546869 FBXO46Q6PJ61 603 aaPredicted RBP16.93■□□□□ 0.3
DDX54-203ENST00000546869 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
DDX54-203ENST00000546869 RIOX2Q8IUF8 465 aa16.93■□□□□ 0.3
DDX54-203ENST00000546869 KIFC2Q96AC6 838 aa16.93■□□□□ 0.3
DDX54-203ENST00000546869 MOV10L1Q9BXT6 1211 aaKnown RBP16.93■□□□□ 0.3
DDX54-203ENST00000546869 MROH8Q9H579 483 aa16.93■□□□□ 0.3
DDX54-203ENST00000546869 ZNF214Q9UL59 606 aaPredicted RBP16.93■□□□□ 0.3
DDX54-203ENST00000546869 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
DDX54-203ENST00000546869 STRNO43815 780 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 PEX10O60683 326 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 IRF5Q13568 498 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 CCDC96Q2M329 555 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 GPR142Q7Z601 462 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 CATIPQ7Z7H3 387 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 TEX13BQ9BXU2 312 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 MCOLN1Q9GZU1 580 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 PORCNQ9H237 461 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 SENP2Q9HC62 589 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 GJD2Q9UKL4 321 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 PNMA2Q9UL42 364 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 PRR12Q9ULL5 1215 aa16.92■□□□□ 0.3
DDX54-203ENST00000546869 PALM3A6NDB9 673 aaPredicted RBP16.91■□□□□ 0.3
DDX54-203ENST00000546869 DDAH1O94760 285 aa16.91■□□□□ 0.3
DDX54-203ENST00000546869 PARP1P09874 1014 aaKnown RBP16.91■□□□□ 0.3
DDX54-203ENST00000546869 TTBK2Q6IQ55 1244 aa16.91■□□□□ 0.3
DDX54-203ENST00000546869 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDX54-203ENST00000546869 RASGRP2Q7LDG7 609 aa16.91■□□□□ 0.3
DDX54-203ENST00000546869 PLEKHH3Q7Z736 793 aa16.91■□□□□ 0.3
DDX54-203ENST00000546869 CCAR1Q8IX12 1150 aaKnown RBP16.91■□□□□ 0.3
DDX54-203ENST00000546869 ABRAQ8N0Z2 381 aa16.91■□□□□ 0.3
DDX54-203ENST00000546869 JAKMIP1Q96N16 626 aaKnown RBP16.91■□□□□ 0.3
DDX54-203ENST00000546869 RANBP17Q9H2T7 1088 aaKnown RBP16.91■□□□□ 0.3
DDX54-203ENST00000546869 ZSWIM6Q9HCJ5 1215 aa16.91■□□□□ 0.3
DDX54-203ENST00000546869 PARP14Q460N5 1801 aa16.91■□□□□ 0.3
DDX54-203ENST00000546869 SLC15A5A6NIM6 579 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 SEC24BO95487 1268 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 CALM1P0DP23 149 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 CALM2P0DP24 149 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 CALM3P0DP25 149 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 ERCC3P19447 782 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 IKQ13123 557 aaPredicted RBP16.9■□□□□ 0.3
DDX54-203ENST00000546869 GRM4Q14833 912 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 MORN1Q5T089 497 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 SYDE2Q5VT97 1194 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 BLOC1S2Q6QNY1 142 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 USP6NLQ92738 828 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 AGXT2Q9BYV1 514 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 GPCPD1Q9NPB8 672 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 MAD2L2Q9UI95 211 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 MTMR7Q9Y216 660 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 CTDP1Q9Y5B0 961 aaPredicted RBP16.9■□□□□ 0.3
DDX54-203ENST00000546869 ZNF536O15090 1300 aa16.9■□□□□ 0.3
DDX54-203ENST00000546869 FRMPD2Q68DX3 1309 aaPredicted RBP16.9■□□□□ 0.3
DDX54-203ENST00000546869 CCDC69A6NI79 296 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 XRCC5P13010 732 aaKnown RBP16.89■□□□□ 0.29
DDX54-203ENST00000546869 RPS6KB1P23443 525 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 PTPREP23469 700 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 SMARCA1P28370 1054 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 RCAN1P53805 252 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 PRKCZQ05513 592 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 PLS1Q14651 629 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 TKFCQ3LXA3 575 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 RUFY3Q7L099 469 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 ZNF654Q8IZM8 581 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 PXYLP1Q8TE99 480 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 SOCS4Q8WXH5 440 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 NUDT12Q9BQG2 462 aa16.89■□□□□ 0.29
DDX54-203ENST00000546869 GPHNQ9NQX3 736 aaPredicted RBP16.89■□□□□ 0.29
DDX54-203ENST00000546869 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
DDX54-203ENST00000546869 ICAM1P05362 532 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 GOLGA8HP0CJ92 632 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 SLC16A2P36021 539 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 FLT3LGP49771 235 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 GRB14Q14449 540 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 SNRNP48Q6IEG0 339 aaKnown RBP16.88■□□□□ 0.29
DDX54-203ENST00000546869 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
DDX54-203ENST00000546869 NFXL1Q6ZNB6 911 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 TNS4Q8IZW8 715 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 CHST13Q8NET6 341 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 MAF1Q9H063 256 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 RAVER2Q9HCJ3 691 aaKnown RBP16.88■□□□□ 0.29
DDX54-203ENST00000546869 FBXO40Q9UH90 709 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 GABRQQ9UN88 632 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 IVNS1ABPQ9Y6Y0 642 aa16.88■□□□□ 0.29
DDX54-203ENST00000546869 KLRF2D3W0D1 207 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 HOXC6P09630 235 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 CASTP20810 708 aaKnown RBP16.87■□□□□ 0.29
DDX54-203ENST00000546869 KIF5BP33176 963 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 EVCP57679 992 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 NCAPG2Q86XI2 1143 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 TRMT44Q8IYL2 757 aaKnown RBP16.87■□□□□ 0.29
DDX54-203ENST00000546869 ADGRF4Q8IZF3 695 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 STAG2Q8N3U4 1231 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 CHMP4CQ96CF2 233 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms