RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 CATIPQ7Z7H3 387 aa19.66■□□□□ 0.74
CCDC38-203ENST00000546803 JAKMIP1Q96N16 626 aaKnown RBP19.66■□□□□ 0.74
CCDC38-203ENST00000546803 MOV10L1Q9BXT6 1211 aaKnown RBP19.66■□□□□ 0.74
CCDC38-203ENST00000546803 LY9Q9HBG7 655 aa19.66■□□□□ 0.74
CCDC38-203ENST00000546803 SLC38A10Q9HBR0 1119 aa19.66■□□□□ 0.74
CCDC38-203ENST00000546803 GPCPD1Q9NPB8 672 aa19.66■□□□□ 0.74
CCDC38-203ENST00000546803 FRMPD2Q68DX3 1309 aaPredicted RBP19.66■□□□□ 0.74
CCDC38-203ENST00000546803 ECM2O94769 699 aaPredicted RBP19.65■□□□□ 0.74
CCDC38-203ENST00000546803 SLC25A27O95847 323 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 PARP1P09874 1014 aaKnown RBP19.65■□□□□ 0.74
CCDC38-203ENST00000546803 STAT3P40763 770 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 OAZ1P54368 228 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 PLS1Q14651 629 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 C8orf34Q49A92 452 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 SYDE2Q5VT97 1194 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 TTBK2Q6IQ55 1244 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 BLOC1S2Q6QNY1 142 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 RIOX2Q8IUF8 465 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 TEX13BQ9BXU2 312 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 MCOLN1Q9GZU1 580 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 PORCNQ9H237 461 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 MROH8Q9H579 483 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 ZNF214Q9UL59 606 aaPredicted RBP19.65■□□□□ 0.74
CCDC38-203ENST00000546803 PRR12Q9ULL5 1215 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 PTPN22Q9Y2R2 807 aa19.65■□□□□ 0.74
CCDC38-203ENST00000546803 COL9A3Q14050 684 aaPredicted RBP19.64■□□□□ 0.73
CCDC38-203ENST00000546803 NFXL1Q6ZNB6 911 aa19.64■□□□□ 0.73
CCDC38-203ENST00000546803 PLEKHH3Q7Z736 793 aa19.64■□□□□ 0.73
CCDC38-203ENST00000546803 MAP3K14Q99558 947 aa19.64■□□□□ 0.73
CCDC38-203ENST00000546803 SENP2Q9HC62 589 aa19.64■□□□□ 0.73
CCDC38-203ENST00000546803 CWC22Q9HCG8 908 aaKnown RBP19.64■□□□□ 0.73
CCDC38-203ENST00000546803 CCDC69A6NI79 296 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 DDAH1O94760 285 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 SLC16A2P36021 539 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 ANAPC15P60006 121 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 TROAPQ12815 778 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 GPR142Q7Z601 462 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 SGMS1Q86VZ5 419 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 TNS4Q8IZW8 715 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 SOCS4Q8WXH5 440 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 TM6SF1Q9BZW5 370 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 GPHNQ9NQX3 736 aaPredicted RBP19.63■□□□□ 0.73
CCDC38-203ENST00000546803 PNMA2Q9UL42 364 aa19.63■□□□□ 0.73
CCDC38-203ENST00000546803 STRNO43815 780 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 GOLGA8HP0CJ92 632 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 ERCC3P19447 782 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 PRKCZQ05513 592 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 GRM4Q14833 912 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 WDR78Q5VTH9 848 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 NCAPG2Q86XI2 1143 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 ZNF654Q8IZM8 581 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 CPXCR1Q8N123 301 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 NUDT12Q9BQG2 462 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 LRRC2Q9BYS8 371 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 RANBP17Q9H2T7 1088 aaKnown RBP19.62■□□□□ 0.73
CCDC38-203ENST00000546803 GJD2Q9UKL4 321 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 IVNS1ABPQ9Y6Y0 642 aa19.62■□□□□ 0.73
CCDC38-203ENST00000546803 CASP8AP2Q9UKL3 1982 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 MYH4Q9Y623 1939 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 PALM3A6NDB9 673 aaPredicted RBP19.61■□□□□ 0.73
CCDC38-203ENST00000546803 SEC24BO95487 1268 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 CALM1P0DP23 149 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 CALM2P0DP24 149 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 CALM3P0DP25 149 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 CASTP20810 708 aaKnown RBP19.61■□□□□ 0.73
CCDC38-203ENST00000546803 RPS6KB1P23443 525 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 FLT3LGP49771 235 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 FGD1P98174 961 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 IRF5Q13568 498 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 SNRNP48Q6IEG0 339 aaKnown RBP19.61■□□□□ 0.73
CCDC38-203ENST00000546803 SYNE3Q6ZMZ3 975 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 FBXL16Q8N461 479 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 RAET1EQ8TD07 263 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 RAVER2Q9HCJ3 691 aaKnown RBP19.61■□□□□ 0.73
CCDC38-203ENST00000546803 ZSWIM6Q9HCJ5 1215 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 SLC12A7Q9Y666 1083 aa19.61■□□□□ 0.73
CCDC38-203ENST00000546803 SLC15A5A6NIM6 579 aa19.6■□□□□ 0.73
CCDC38-203ENST00000546803 PTPREP23469 700 aa19.6■□□□□ 0.73
CCDC38-203ENST00000546803 KIF5BP33176 963 aa19.6■□□□□ 0.73
CCDC38-203ENST00000546803 ABRAQ8N0Z2 381 aa19.6■□□□□ 0.73
CCDC38-203ENST00000546803 NUP133Q8WUM0 1156 aa19.6■□□□□ 0.73
CCDC38-203ENST00000546803 TCEANC2Q96MN5 208 aa19.6■□□□□ 0.73
CCDC38-203ENST00000546803 MAD2L2Q9UI95 211 aa19.6■□□□□ 0.73
CCDC38-203ENST00000546803 GABRQQ9UN88 632 aa19.6■□□□□ 0.73
CCDC38-203ENST00000546803 CYP46A1Q9Y6A2 500 aa19.6■□□□□ 0.73
CCDC38-203ENST00000546803 PTCH2Q9Y6C5 1203 aa19.6■□□□□ 0.73
CCDC38-203ENST00000546803 ZNF536O15090 1300 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 KLRF2D3W0D1 207 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 ICAM1P05362 532 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 GNAQP50148 359 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 TKFCQ3LXA3 575 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 MORN1Q5T089 497 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 RUFY3Q7L099 469 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 STAG2Q8N3U4 1231 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 CHST13Q8NET6 341 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 CTCFLQ8NI51 663 aaPredicted RBP19.59■□□□□ 0.73
CCDC38-203ENST00000546803 IL17RAQ96F46 866 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 UBA5Q9GZZ9 404 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 FBXO40Q9UH90 709 aa19.59■□□□□ 0.73
CCDC38-203ENST00000546803 FCER1AP12319 257 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms