RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
TROAP-204ENST00000546776 BMP3P12645 472 aa13.03□□□□□ -0.32
TROAP-204ENST00000546776 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
TROAP-204ENST00000546776 SP3Q02447 781 aa13.03□□□□□ -0.32
TROAP-204ENST00000546776 ZNF543Q08ER8 600 aa13.03□□□□□ -0.32
TROAP-204ENST00000546776 MTMR2Q13614 643 aa13.03□□□□□ -0.32
TROAP-204ENST00000546776 KIF22Q14807 665 aa13.03□□□□□ -0.32
TROAP-204ENST00000546776 ZYXQ15942 572 aaKnown RBP13.03□□□□□ -0.32
TROAP-204ENST00000546776 NCOA5Q9HCD5 579 aaKnown RBP13.03□□□□□ -0.32
TROAP-204ENST00000546776 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
TROAP-204ENST00000546776 RBM27Q9P2N5 1060 aaKnown RBP13.03□□□□□ -0.32
TROAP-204ENST00000546776 PNMA3Q9UL41 463 aa13.03□□□□□ -0.32
TROAP-204ENST00000546776 PALM3A6NDB9 673 aaPredicted RBP13.02□□□□□ -0.33
TROAP-204ENST00000546776 WDR46O15213 610 aaKnown RBP13.02□□□□□ -0.33
TROAP-204ENST00000546776 TLR2O60603 784 aa13.02□□□□□ -0.33
TROAP-204ENST00000546776 IFNAR1P17181 557 aa13.02□□□□□ -0.33
TROAP-204ENST00000546776 SMARCA1P28370 1054 aa13.02□□□□□ -0.33
TROAP-204ENST00000546776 ADD1P35611 737 aaKnown RBP13.02□□□□□ -0.33
TROAP-204ENST00000546776 BACE1P56817 501 aa13.02□□□□□ -0.33
TROAP-204ENST00000546776 SSRP1Q08945 709 aaKnown RBP13.02□□□□□ -0.33
TROAP-204ENST00000546776 IFFO2Q5TF58 517 aa13.02□□□□□ -0.33
TROAP-204ENST00000546776 TMTC3Q6ZXV5 915 aa13.02□□□□□ -0.33
TROAP-204ENST00000546776 CCDC84Q86UT8 332 aaPredicted RBP13.02□□□□□ -0.33
TROAP-204ENST00000546776 FAM184AQ8NB25 1140 aa13.02□□□□□ -0.33
TROAP-204ENST00000546776 PROCA1Q8NCQ7 364 aaPredicted RBP13.02□□□□□ -0.33
TROAP-204ENST00000546776 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.02□□□□□ -0.33
TROAP-204ENST00000546776 MAD2L2Q9UI95 211 aa13.02□□□□□ -0.33
TROAP-204ENST00000546776 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.33
TROAP-204ENST00000546776 PTPRFP10586 1907 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 PTPDC1A2A3K4 754 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 KLRF2D3W0D1 207 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 PDIA4P13667 645 aaKnown RBP13.01□□□□□ -0.33
TROAP-204ENST00000546776 OSBPP22059 807 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 CDC27P30260 824 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 IKQ13123 557 aaPredicted RBP13.01□□□□□ -0.33
TROAP-204ENST00000546776 NSUN7Q8NE18 718 aaKnown RBP13.01□□□□□ -0.33
TROAP-204ENST00000546776 SMCR8Q8TEV9 937 aaPredicted RBP13.01□□□□□ -0.33
TROAP-204ENST00000546776 WASF1Q92558 559 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 C12orf42Q96LP6 360 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 RNF26Q9BY78 433 aaPredicted RBP13.01□□□□□ -0.33
TROAP-204ENST00000546776 MCOLN1Q9GZU1 580 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 R3HDMLQ9H3Y0 253 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
TROAP-204ENST00000546776 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
TROAP-204ENST00000546776 STK36Q9NRP7 1315 aa13.01□□□□□ -0.33
TROAP-204ENST00000546776 GOLGA8HP0CJ92 632 aa13□□□□□ -0.33
TROAP-204ENST00000546776 PDCP20941 246 aa13□□□□□ -0.33
TROAP-204ENST00000546776 HMGCS2P54868 508 aa13□□□□□ -0.33
TROAP-204ENST00000546776 ST3GAL1Q11201 340 aa13□□□□□ -0.33
TROAP-204ENST00000546776 MOGSQ13724 837 aa13□□□□□ -0.33
TROAP-204ENST00000546776 SH3D19Q5HYK7 790 aa13□□□□□ -0.33
TROAP-204ENST00000546776 GPAT2Q6NUI2 795 aa13□□□□□ -0.33
TROAP-204ENST00000546776 FAM160B2Q86V87 743 aa13□□□□□ -0.33
TROAP-204ENST00000546776 SPICE1Q8N0Z3 855 aa13□□□□□ -0.33
TROAP-204ENST00000546776 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
TROAP-204ENST00000546776 SMARCC2Q8TAQ2 1214 aa13□□□□□ -0.33
TROAP-204ENST00000546776 CHURC1Q8WUH1 139 aa13□□□□□ -0.33
TROAP-204ENST00000546776 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
TROAP-204ENST00000546776 SLC26A6Q9BXS9 759 aa13□□□□□ -0.33
TROAP-204ENST00000546776 GPCPD1Q9NPB8 672 aa13□□□□□ -0.33
TROAP-204ENST00000546776 FOXD4L1Q9NU39 408 aa13□□□□□ -0.33
TROAP-204ENST00000546776 ORC3Q9UBD5 711 aaPredicted RBP13□□□□□ -0.33
TROAP-204ENST00000546776 FEM1BQ9UK73 627 aa13□□□□□ -0.33
TROAP-204ENST00000546776 CASP8AP2Q9UKL3 1982 aa13□□□□□ -0.33
TROAP-204ENST00000546776 PLA2G6O60733 806 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 PLEKHA8P1O95397 391 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 FMNL1O95466 1100 aaPredicted RBP12.99□□□□□ -0.33
TROAP-204ENST00000546776 XBP1P17861 261 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 GJB2P29033 226 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 STAT2P52630 851 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 NTRK3Q16288 839 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 FAM83BQ5T0W9 1011 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 KCTD1Q719H9 257 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 STAG2Q8N3U4 1231 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 CCDC82Q8N4S0 544 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 SRBD1Q8N5C6 995 aaKnown RBP12.99□□□□□ -0.33
TROAP-204ENST00000546776 RRP36Q96EU6 259 aaKnown RBP12.99□□□□□ -0.33
TROAP-204ENST00000546776 ABHD8Q96I13 439 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 EFCC1Q9HA90 598 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
TROAP-204ENST00000546776 TRIM17Q9Y577 477 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 LOC285556D6RIA3 1793 aa12.99□□□□□ -0.33
TROAP-204ENST00000546776 CNTNAP5Q8WYK1 1306 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 TMEM232C9JQI7 657 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 PRPF3O43395 683 aaKnown RBP12.98□□□□□ -0.33
TROAP-204ENST00000546776 JAK2O60674 1132 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 DEXIO95424 95 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 CTDNEP1O95476 244 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 GNRH1P01148 92 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 VCAM1P19320 739 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 IRX3P78415 501 aaPredicted RBP12.98□□□□□ -0.33
TROAP-204ENST00000546776 TRAF1Q13077 416 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 TRIM29Q14134 588 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 BTNL9Q6UXG8 535 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 CD99L2Q8TCZ2 262 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 PHKBQ93100 1093 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 DDX11Q96FC9 970 aa12.98□□□□□ -0.33
TROAP-204ENST00000546776 TANGO6Q9C0B7 1094 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms