RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 FPGSQ05932 587 aa17.4■□□□□ 0.38
USP15-206ENST00000546718 UBE3CQ15386 1083 aa17.4■□□□□ 0.38
USP15-206ENST00000546718 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.4■□□□□ 0.385e-22■■□□□ 11.5
USP15-206ENST00000546718 CNPY2Q9Y2B0 182 aa17.4■□□□□ 0.38
USP15-206ENST00000546718 MYADML2A6NDP7 307 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 ADCY6O43306 1168 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 RAD21O60216 631 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 SNAI1O95863 264 aaPredicted RBP17.39■□□□□ 0.37
USP15-206ENST00000546718 DNAJB2P25686 324 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 COPB2P35606 906 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 CCSAPQ6IQ19 270 aaPredicted RBP17.39■□□□□ 0.37
USP15-206ENST00000546718 RPAP2Q8IXW5 612 aaPredicted RBP17.39■□□□□ 0.37
USP15-206ENST00000546718 AMOTL1Q8IY63 956 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 USP38Q8NB14 1042 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 TSEN34Q9BSV6 310 aaKnown RBP17.39■□□□□ 0.37
USP15-206ENST00000546718 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 PUS7LQ9H0K6 701 aaKnown RBP17.39■□□□□ 0.37
USP15-206ENST00000546718 TMEM39AQ9NV64 488 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 RIPK3Q9Y572 518 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 SLC4A4Q9Y6R1 1079 aa17.39■□□□□ 0.37
USP15-206ENST00000546718 DNAJC25-GNG10A0A024R161 153 aa17.38■□□□□ 0.37
USP15-206ENST00000546718 HMMRO75330 724 aa17.38■□□□□ 0.37
USP15-206ENST00000546718 IRX5P78411 483 aaPredicted RBP17.38■□□□□ 0.37
USP15-206ENST00000546718 GRIN2CQ14957 1233 aa17.38■□□□□ 0.37
USP15-206ENST00000546718 SNRNP48Q6IEG0 339 aaKnown RBP17.38■□□□□ 0.37
USP15-206ENST00000546718 KLHDC9Q8NEP7 349 aa17.38■□□□□ 0.37
USP15-206ENST00000546718 TOX2Q96NM4 488 aa17.38■□□□□ 0.37
USP15-206ENST00000546718 SLF1Q9BQI6 1058 aa17.38■□□□□ 0.37
USP15-206ENST00000546718 STARD7Q9NQZ5 370 aa17.38■□□□□ 0.37
USP15-206ENST00000546718 ZBTB40Q9NUA8 1239 aa17.38■□□□□ 0.37
USP15-206ENST00000546718 TBX21Q9UL17 535 aa17.38■□□□□ 0.37
USP15-206ENST00000546718 SYNGAP1Q96PV0 1343 aa17.38■□□□□ 0.37
USP15-206ENST00000546718 TRANK1O15050 2925 aa17.37■□□□□ 0.37
USP15-206ENST00000546718 RAB11FIP3O75154 756 aa17.37■□□□□ 0.37
USP15-206ENST00000546718 RASA1P20936 1047 aa17.37■□□□□ 0.37
USP15-206ENST00000546718 MAMDC4Q6UXC1 1216 aa17.37■□□□□ 0.37
USP15-206ENST00000546718 MSL3Q8N5Y2 521 aaKnown RBP17.37■□□□□ 0.37
USP15-206ENST00000546718 DDRGK1Q96HY6 314 aa17.37■□□□□ 0.37
USP15-206ENST00000546718 ARPP21Q9UBL0 812 aaPredicted RBP17.37■□□□□ 0.37
USP15-206ENST00000546718 MOXD2PA6NHM9 499 aa17.36■□□□□ 0.37
USP15-206ENST00000546718 DCDC2CA8MYV0 355 aa17.36■□□□□ 0.37
USP15-206ENST00000546718 NDUFB10O96000 172 aa17.36■□□□□ 0.37
USP15-206ENST00000546718 KCNA10Q16322 511 aa17.36■□□□□ 0.37
USP15-206ENST00000546718 NUP133Q8WUM0 1156 aa17.36■□□□□ 0.37
USP15-206ENST00000546718 FGD4Q96M96 766 aa17.36■□□□□ 0.37
USP15-206ENST00000546718 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.36■□□□□ 0.37
USP15-206ENST00000546718 ZHX1Q9UKY1 873 aaPredicted RBP17.36■□□□□ 0.37
USP15-206ENST00000546718 MCM3APO60318 1980 aa17.36■□□□□ 0.37
USP15-206ENST00000546718 TIMP1P01033 207 aa17.35■□□□□ 0.37
USP15-206ENST00000546718 CST5P28325 142 aaPredicted RBP17.35■□□□□ 0.37
USP15-206ENST00000546718 C16orf59Q7L2K0 433 aa17.35■□□□□ 0.37
USP15-206ENST00000546718 NYAP2Q9P242 653 aa17.35■□□□□ 0.37
USP15-206ENST00000546718 FAM184BQ9ULE4 1060 aa17.35■□□□□ 0.37
USP15-206ENST00000546718 COG6Q9Y2V7 657 aa17.35■□□□□ 0.37
USP15-206ENST00000546718 MYH4Q9Y623 1939 aa17.35■□□□□ 0.37
USP15-206ENST00000546718 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.34■□□□□ 0.37
USP15-206ENST00000546718 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.34■□□□□ 0.37
USP15-206ENST00000546718 GSG1L2A8MUP6 293 aa17.34■□□□□ 0.37
USP15-206ENST00000546718 F5H6K3 240 aa17.34■□□□□ 0.37
USP15-206ENST00000546718 ATP2A1O14983 1001 aa17.34■□□□□ 0.37
USP15-206ENST00000546718 DUSP11O75319 330 aaKnown RBP17.34■□□□□ 0.37
USP15-206ENST00000546718 CDK7P50613 346 aa17.34■□□□□ 0.37
USP15-206ENST00000546718 KLRC3Q07444 240 aa17.34■□□□□ 0.37
USP15-206ENST00000546718 SBK1Q52WX2 424 aa17.34■□□□□ 0.37
USP15-206ENST00000546718 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.34■□□□□ 0.37
USP15-206ENST00000546718 ZNF467Q7Z7K2 595 aaPredicted RBP17.34■□□□□ 0.37
USP15-206ENST00000546718 STK11IPQ8N1F8 1099 aa17.34■□□□□ 0.37
USP15-206ENST00000546718 PRPF38AQ8NAV1 312 aaKnown RBP17.34■□□□□ 0.37
USP15-206ENST00000546718 DDX11Q96FC9 970 aa17.34■□□□□ 0.37
USP15-206ENST00000546718 STRBPQ96SI9 672 aaKnown RBP17.34■□□□□ 0.37
USP15-206ENST00000546718 PRDM6Q9NQX0 595 aa17.34■□□□□ 0.37
USP15-206ENST00000546718 DDX19BQ9UMR2 479 aa17.34■□□□□ 0.37
USP15-206ENST00000546718 LRRC37A2A6NM11 1700 aa17.33■□□□□ 0.37
USP15-206ENST00000546718 ELP1O95163 1332 aa17.33■□□□□ 0.36
USP15-206ENST00000546718 BDP1A6H8Y1 2624 aa17.33■□□□□ 0.36
USP15-206ENST00000546718 IGKV6D-41A0A0C4DH26 115 aa17.33■□□□□ 0.36
USP15-206ENST00000546718 ACVR2BQ13705 512 aa17.33■□□□□ 0.36
USP15-206ENST00000546718 RASIP1Q5U651 963 aa17.33■□□□□ 0.36
USP15-206ENST00000546718 MFSD5Q6N075 450 aa17.33■□□□□ 0.36
USP15-206ENST00000546718 CPXCR1Q8N123 301 aa17.33■□□□□ 0.36
USP15-206ENST00000546718 TIFAQ96CG3 184 aa17.33■□□□□ 0.36
USP15-206ENST00000546718 UPF3AQ9H1J1 476 aaKnown RBP17.33■□□□□ 0.36
USP15-206ENST00000546718 ZNF576Q9H609 170 aa17.33■□□□□ 0.36
USP15-206ENST00000546718 EPB41L4AQ9HCS5 686 aaPredicted RBP17.33■□□□□ 0.36
USP15-206ENST00000546718 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.33■□□□□ 0.36
USP15-206ENST00000546718 MROH7Q68CQ1 1323 aa17.32■□□□□ 0.36
USP15-206ENST00000546718 CTAGE5O15320 804 aa17.32■□□□□ 0.36
USP15-206ENST00000546718 ASGR1P07306 291 aa17.32■□□□□ 0.36
USP15-206ENST00000546718 C6orf222P0C671 652 aaPredicted RBP17.32■□□□□ 0.36
USP15-206ENST00000546718 PBX2P40425 430 aa17.32■□□□□ 0.36
USP15-206ENST00000546718 CCDC144BQ3MJ40 725 aa17.32■□□□□ 0.36
USP15-206ENST00000546718 ZSCAN25Q6NSZ9 544 aa17.32■□□□□ 0.36
USP15-206ENST00000546718 GLT1D1Q96MS3 346 aa17.32■□□□□ 0.36
USP15-206ENST00000546718 KATNBL1Q9H079 304 aa17.32■□□□□ 0.36
USP15-206ENST00000546718 SLC38A10Q9HBR0 1119 aa17.32■□□□□ 0.36
USP15-206ENST00000546718 RAVER2Q9HCJ3 691 aaKnown RBP17.32■□□□□ 0.36
USP15-206ENST00000546718 GRXCR1A8MXD5 290 aa17.31■□□□□ 0.36
USP15-206ENST00000546718 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
USP15-206ENST00000546718 MS4A1P11836 297 aa17.31■□□□□ 0.36
USP15-206ENST00000546718 CSF2RAP15509 400 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms