RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 EIF3CLB5ME19 914 aaKnown RBP16.47■□□□□ 0.23
HOXC11-202ENST00000546378 ECM2O94769 699 aaPredicted RBP16.47■□□□□ 0.23
HOXC11-202ENST00000546378 MYBL2P10244 700 aa16.47■□□□□ 0.23
HOXC11-202ENST00000546378 HDAC7Q8WUI4 952 aa16.47■□□□□ 0.23
HOXC11-202ENST00000546378 EIF3CQ99613 913 aaKnown RBP16.47■□□□□ 0.23
HOXC11-202ENST00000546378 AGXT2Q9BYV1 514 aa16.47■□□□□ 0.23
HOXC11-202ENST00000546378 AATFQ9NY61 560 aaKnown RBP eCLIP16.47■□□□□ 0.23
HOXC11-202ENST00000546378 ADAMTS7Q9UKP4 1686 aa16.47■□□□□ 0.23
HOXC11-202ENST00000546378 CCDC151A5D8V7 595 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 CYP2D6P10635 497 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 PTPREP23469 700 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 TTC38Q5R3I4 469 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 HEATR3Q7Z4Q2 680 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 SRLQ86TD4 932 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 RRP36Q96EU6 259 aaKnown RBP16.46■□□□□ 0.23
HOXC11-202ENST00000546378 NLRC4Q9NPP4 1024 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 USP5P45974 858 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 NR1I3Q14994 352 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 NTRK3Q16288 839 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 SPATA1Q5VX52 437 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 FBXW10Q5XX13 1052 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 BRMS1Q9HCU9 246 aa16.46■□□□□ 0.23
HOXC11-202ENST00000546378 EPN1Q9Y6I3 576 aaPredicted RBP16.46■□□□□ 0.23
HOXC11-202ENST00000546378 TOGARAM1Q9Y4F4 1720 aa16.46■□□□□ 0.22
HOXC11-202ENST00000546378 GOLGA6L9A6NEM1 432 aa16.46■□□□□ 0.22
HOXC11-202ENST00000546378 KRT2P35908 639 aa16.46■□□□□ 0.22
HOXC11-202ENST00000546378 ENOX1Q8TC92 643 aaKnown RBP16.46■□□□□ 0.22
HOXC11-202ENST00000546378 AFAP1L1Q8TED9 768 aa16.46■□□□□ 0.22
HOXC11-202ENST00000546378 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.22
HOXC11-202ENST00000546378 MLXIPQ9HAP2 919 aa16.46■□□□□ 0.22
HOXC11-202ENST00000546378 PACSIN2Q9UNF0 486 aaPredicted RBP16.46■□□□□ 0.22
HOXC11-202ENST00000546378 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 CRACR2BQ8N4Y2 399 aaPredicted RBP16.45■□□□□ 0.22
HOXC11-202ENST00000546378 JAKMIP2Q96AA8 810 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 BPIFA3Q9BQP9 254 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 TSPY2A6NKD2 308 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 USP17L12C9JPN9 530 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 USP17L21D6R901 530 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 NKRFO15226 690 aaKnown RBP eCLIP16.45■□□□□ 0.22
HOXC11-202ENST00000546378 MARCH6O60337 910 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 COPB1P53618 953 aaKnown RBP16.45■□□□□ 0.22
HOXC11-202ENST00000546378 PMS1P54277 932 aaKnown RBP16.45■□□□□ 0.22
HOXC11-202ENST00000546378 PAK1Q13153 545 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 RSRC2Q7L4I2 434 aaKnown RBP16.45■□□□□ 0.22
HOXC11-202ENST00000546378 GOLGA5Q8TBA6 731 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 GJA10Q969M2 543 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.45■□□□□ 0.22
HOXC11-202ENST00000546378 LACRTQ9GZZ8 138 aa16.45■□□□□ 0.22
HOXC11-202ENST00000546378 ACTN4O43707 911 aaKnown RBP16.44■□□□□ 0.22
HOXC11-202ENST00000546378 DEXIO95424 95 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 IGHMBP2P38935 993 aaKnown RBP16.44■□□□□ 0.22
HOXC11-202ENST00000546378 UBA7P41226 1012 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
HOXC11-202ENST00000546378 STIM1Q13586 685 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 LLGL1Q15334 1064 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 ABHD10Q9NUJ1 306 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 PDE8BO95263 885 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 PRCPP42785 496 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 TBC1D8BQ0IIM8 1120 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 CNGA4Q8IV77 575 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 CCDC155Q8N6L0 562 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 WASF1Q92558 559 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 ZNHIT6Q9NWK9 470 aaKnown RBP16.44■□□□□ 0.22
HOXC11-202ENST00000546378 GSG1L2A8MUP6 293 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 AKR1B10O60218 316 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
HOXC11-202ENST00000546378 TTF1Q15361 905 aaPredicted RBP16.44■□□□□ 0.22
HOXC11-202ENST00000546378 INF2Q27J81 1249 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 ADGRA1Q86SQ6 560 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 PACS2Q86VP3 889 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 BCAS4Q8TDM0 211 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 LRRC4BQ9NT99 713 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 CEP131Q9UPN4 1083 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 PLCH1Q4KWH8 1693 aa16.44■□□□□ 0.22
HOXC11-202ENST00000546378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.43■□□□□ 0.22
HOXC11-202ENST00000546378 ZSCAN5CA6NGD5 496 aaPredicted RBP16.43■□□□□ 0.22
HOXC11-202ENST00000546378 ASIC1P78348 528 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 LRRC41Q15345 812 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 CCDC152Q4G0S7 254 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 GOLPH3Q9H4A6 298 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 SMIM23A6NLE4 172 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 MOCS3O95396 460 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
HOXC11-202ENST00000546378 PDCLQ13371 301 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 LETM2Q2VYF4 491 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 C2CD5Q86YS7 1000 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
HOXC11-202ENST00000546378 MS4A14Q96JA4 679 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 TMEM87BQ96K49 555 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 SLC39A2Q9NP94 309 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.43■□□□□ 0.22
HOXC11-202ENST00000546378 LRWD1Q9UFC0 647 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 SAR1BQ9Y6B6 198 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 LOC102724159A0A0B4J2E5 919 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 GOLGA6CA6NDK9 693 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 CSF1RP07333 972 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 GOLGA6DP0CG33 693 aa16.43■□□□□ 0.22
HOXC11-202ENST00000546378 PWP2Q15269 919 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms