RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 KIF23Q02241 960 aaPredicted RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 CWF19L2Q2TBE0 894 aaKnown RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 TRAPPC11Q7Z392 1133 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 ZC3H18Q86VM9 953 aaKnown RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 NCOA7Q8NI08 942 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 AGAP11Q8TF27 550 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 WASF1Q92558 559 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 C2CD2Q9Y426 696 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 ZMYM6O95789 1325 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 CCT8L1PA6NM43 557 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 CEP104O60308 925 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 ZFYP08048 801 aaPredicted RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 SKOR1P84550 965 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 MAP7Q14244 749 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 NR1I3Q14994 352 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 SH2D4BQ5SQS7 431 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 MIS18BP1Q6P0N0 1132 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 FAM47EQ6ZV65 393 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 FNBP4Q8N3X1 1017 aaPredicted RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 NOX5Q96PH1 765 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 NUP58Q9BVL2 599 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 TEX13AQ9BXU3 409 aaPredicted RBP11.44□□□□□ -0.58
SOD2-216ENST00000546260 INTS13Q9NVM9 706 aa11.44□□□□□ -0.58
SOD2-216ENST00000546260 SALL3Q9BXA9 1300 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 LRRIQ1Q96JM4 1722 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 CFAP73A6NFT4 308 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 MMEP08473 750 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 ERCC5P28715 1186 aaPredicted RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 MORC3Q14149 939 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 IFI16Q16666 785 aaKnown RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 CWF19L1Q69YN2 538 aaKnown RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 SHC4Q6S5L8 630 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 SDCCAG8Q86SQ7 713 aaPredicted RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 CCDC25Q86WR0 208 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 C2CD5Q86YS7 1000 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 OSCARQ8IYS5 282 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 SNRNP27Q8WVK2 155 aaKnown RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 NELFBQ8WX92 580 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 PRCCQ92733 491 aaPredicted RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 CHMP6Q96FZ7 201 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 NAF1Q96HR8 494 aaKnown RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 ZNF330Q9Y3S2 320 aaPredicted RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 GRIN2DO15399 1336 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 YTHDC2Q9H6S0 1430 aaKnown RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 CCND1P24385 295 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 CDC27P30260 824 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 KLC1Q07866 573 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 KRT31Q15323 416 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 INF2Q27J81 1249 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 GLE1Q53GS7 698 aaKnown RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 P3H4Q92791 437 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 STMN2Q93045 179 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 CWC25Q9NXE8 425 aaPredicted RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 TUBE1Q9UJT0 475 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 CORO1CQ9ULV4 474 aaPredicted RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 MROH7-TTC4A0A0A0MT08 1334 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 GNAT3A8MTJ3 354 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 DNM1LO00429 736 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 RGS16O15492 202 aaPredicted RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 RTN3O95197 1032 aaPredicted RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 GYPCP04921 128 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 ERVK-24P63145 666 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 EIF4A2Q14240 407 aaKnown RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 PPP4R3AQ6IN85 833 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 HOOK3Q86VS8 718 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 RAB3IPQ96QF0 476 aaPredicted RBP11.43□□□□□ -0.58
SOD2-216ENST00000546260 MLXIPQ9HAP2 919 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 LEMD3Q9Y2U8 911 aa11.43□□□□□ -0.58
SOD2-216ENST00000546260 SEPT2Q15019 361 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 ABCC10Q5T3U5 1492 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 MRC2Q9UBG0 1479 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 KIAA0232Q92628 1395 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 A0A1B0GTH6 734 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 IGF2BP3O00425 579 aaKnown RBP eCLIP11.42□□□□□ -0.582e-6■□□□□ 11
SOD2-216ENST00000546260 ZNF189O75820 626 aaPredicted RBP11.42□□□□□ -0.58
SOD2-216ENST00000546260 IFIT1P09914 478 aaKnown RBP11.42□□□□□ -0.58
SOD2-216ENST00000546260 SERPINB4P48594 390 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
SOD2-216ENST00000546260 WAPLQ7Z5K2 1190 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 ZNF274Q96GC6 653 aaPredicted RBP11.42□□□□□ -0.58
SOD2-216ENST00000546260 TAF1DQ9H5J8 278 aaPredicted RBP11.42□□□□□ -0.58
SOD2-216ENST00000546260 CABP5Q9NP86 173 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 SLC12A7Q9Y666 1083 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 ZBTB43O43298 467 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 ALDH1L1O75891 902 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 SUN1O94901 812 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 TBX2Q13207 712 aaPredicted RBP11.42□□□□□ -0.58
SOD2-216ENST00000546260 MTMR3Q13615 1198 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 ZC3H12AQ5D1E8 599 aaKnown RBP11.42□□□□□ -0.58
SOD2-216ENST00000546260 BICD1Q96G01 975 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 SH3GL2Q99962 352 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 MMADHCQ9H3L0 296 aaPredicted RBP11.42□□□□□ -0.58
SOD2-216ENST00000546260 KCNJ14Q9UNX9 436 aa11.42□□□□□ -0.58
SOD2-216ENST00000546260 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.41□□□□□ -0.58
SOD2-216ENST00000546260 OPHN1O60890 802 aa11.41□□□□□ -0.58
SOD2-216ENST00000546260 PARP1P09874 1014 aaKnown RBP11.41□□□□□ -0.58
SOD2-216ENST00000546260 PYGBP11216 843 aa11.41□□□□□ -0.58
SOD2-216ENST00000546260 IGHMBP2P38935 993 aaKnown RBP11.41□□□□□ -0.58
SOD2-216ENST00000546260 MRPS35P82673 323 aaKnown RBP11.41□□□□□ -0.58
SOD2-216ENST00000546260 TRIML1Q8N9V2 468 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms