RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CTAGE4Q8IX94 777 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 FAM84BQ96KN1 310 aaPredicted RBP10.98□□□□□ -0.65
TRAF1-203ENST00000546084 EYA3Q99504 573 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 NOC4LQ9BVI4 516 aaKnown RBP10.98□□□□□ -0.65
TRAF1-203ENST00000546084 RTL9Q8NET4 1388 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 ZNF804BA4D1E1 1349 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 SORBS3O60504 671 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 LONRF2Q1L5Z9 754 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 KCTD1Q719H9 257 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 LRP10Q7Z4F1 713 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 SRBD1Q8N5C6 995 aaKnown RBP10.98□□□□□ -0.65
TRAF1-203ENST00000546084 RDH13Q8NBN7 331 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 PAGE5Q96GU1 130 aa10.98□□□□□ -0.65
TRAF1-203ENST00000546084 ZC3H12CQ9C0D7 883 aaKnown RBP10.98□□□□□ -0.65
TRAF1-203ENST00000546084 KCNJ18B7U540 433 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 TRAF5O00463 557 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 WNT7AO00755 349 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 STX10O60499 249 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 PARP1P09874 1014 aaKnown RBP10.97□□□□□ -0.65
TRAF1-203ENST00000546084 TOB1P50616 345 aaPredicted RBP10.97□□□□□ -0.65
TRAF1-203ENST00000546084 MORC3Q14149 939 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 KCNJ12Q14500 433 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 UBE2SQ16763 222 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 GSPT2Q8IYD1 628 aaKnown RBP10.97□□□□□ -0.65
TRAF1-203ENST00000546084 BLIDQ8IZY5 108 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 IFT81Q8WYA0 676 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 CCDC42Q96M95 316 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 SUGCTQ9HAC7 445 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 PDE11AQ9HCR9 933 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 HDAC6Q9UBN7 1215 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 BCS1LQ9Y276 419 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 BUB1O43683 1085 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 EIF3JO75822 258 aaKnown RBP10.97□□□□□ -0.65
TRAF1-203ENST00000546084 SASH3O75995 380 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 CALRP27797 417 aaKnown RBP10.97□□□□□ -0.65
TRAF1-203ENST00000546084 CYP4A11Q02928 519 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 TMEM260Q9NX78 707 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 SETD1AO15047 1707 aaKnown RBP10.97□□□□□ -0.65
TRAF1-203ENST00000546084 FOXP2O15409 715 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 CSF1RP07333 972 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 BTDP43251 543 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 HLTFQ14527 1009 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRAF1-203ENST00000546084 RESP18Q5W5W9 173 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 CTR9Q6PD62 1173 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 CCDC148Q8NFR7 591 aa10.97□□□□□ -0.65
TRAF1-203ENST00000546084 DDX39AO00148 427 aaKnown RBP10.96□□□□□ -0.65
TRAF1-203ENST00000546084 PPP6R2O75170 966 aa10.96□□□□□ -0.65
TRAF1-203ENST00000546084 TBC1D8O95759 1140 aa10.96□□□□□ -0.65
TRAF1-203ENST00000546084 DCAF17Q5H9S7 520 aaPredicted RBP10.96□□□□□ -0.65
TRAF1-203ENST00000546084 PIGSQ96S52 555 aa10.96□□□□□ -0.65
TRAF1-203ENST00000546084 RSPH14Q9UHP6 348 aa10.96□□□□□ -0.65
TRAF1-203ENST00000546084 ADAM21Q9UKJ8 722 aa10.96□□□□□ -0.65
TRAF1-203ENST00000546084 ATP2C2O75185 946 aa10.96□□□□□ -0.65
TRAF1-203ENST00000546084 PTPREP23469 700 aa10.96□□□□□ -0.65
TRAF1-203ENST00000546084 DPP8Q6V1X1 898 aaPredicted RBP10.96□□□□□ -0.65
TRAF1-203ENST00000546084 TICAM2Q86XR7 235 aa10.96□□□□□ -0.65
TRAF1-203ENST00000546084 C2CD5Q86YS7 1000 aa10.96□□□□□ -0.65
TRAF1-203ENST00000546084 RRP36Q96EU6 259 aaKnown RBP10.96□□□□□ -0.65
TRAF1-203ENST00000546084 TUBE1Q9UJT0 475 aa10.96□□□□□ -0.65
TRAF1-203ENST00000546084 PALLDQ8WX93 1383 aa10.96□□□□□ -0.66
TRAF1-203ENST00000546084 KCNJ6P48051 423 aa10.96□□□□□ -0.66
TRAF1-203ENST00000546084 CABP7Q86V35 215 aa10.96□□□□□ -0.66
TRAF1-203ENST00000546084 RABGGTAQ92696 567 aa10.96□□□□□ -0.66
TRAF1-203ENST00000546084 DCP1AQ9NPI6 582 aaPredicted RBP10.96□□□□□ -0.66
TRAF1-203ENST00000546084 CTDP1Q9Y5B0 961 aaPredicted RBP10.96□□□□□ -0.66
TRAF1-203ENST00000546084 JCADQ9P266 1359 aa10.96□□□□□ -0.66
TRAF1-203ENST00000546084 RFX7Q2KHR2 1363 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 MEIS1O00470 390 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 ZRANB2O95218 330 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRAF1-203ENST00000546084 LIFRP42702 1097 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 SNX29Q8TEQ0 813 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 CHP1Q99653 195 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 NCAPD2Q15021 1401 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 TNS3Q68CZ2 1445 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 RPN1P04843 607 aaKnown RBP10.95□□□□□ -0.66
TRAF1-203ENST00000546084 RAPGEF1Q13905 1077 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 TMEM266Q2M3C6 531 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 ADAT2Q7Z6V5 191 aaKnown RBP10.95□□□□□ -0.66
TRAF1-203ENST00000546084 TC2NQ8N9U0 490 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 PROCA1Q8NCQ7 364 aaPredicted RBP10.95□□□□□ -0.66
TRAF1-203ENST00000546084 SMCR8Q8TEV9 937 aaPredicted RBP10.95□□□□□ -0.66
TRAF1-203ENST00000546084 MRPL44Q9H9J2 332 aaKnown RBP10.95□□□□□ -0.66
TRAF1-203ENST00000546084 DBNDD1Q9H9R9 158 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 VEZTQ9HBM0 779 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 FAM217BQ9NTX9 383 aaPredicted RBP10.95□□□□□ -0.66
TRAF1-203ENST00000546084 LRWD1Q9UFC0 647 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 SAMM50Q9Y512 469 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 MRFAP1Q9Y605 127 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 NWD1Q149M9 1564 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 POTEMA6NI47 508 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 LDHCP07864 332 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
TRAF1-203ENST00000546084 TAL1P17542 331 aaPredicted RBP10.95□□□□□ -0.66
TRAF1-203ENST00000546084 PLCD1P51178 756 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 MAP3K9P80192 1104 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 RRAGAQ7L523 313 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 ZNF804AQ7Z570 1209 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 KCND1Q9NSA2 647 aa10.95□□□□□ -0.66
TRAF1-203ENST00000546084 TUBGCP6Q96RT7 1819 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 PIK3C2AO00443 1686 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms