RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 LRIT3Q3SXY7 679 aa11.65□□□□□ -0.54
GABRB3-205ENST00000545868 WDR78Q5VTH9 848 aa11.65□□□□□ -0.54
GABRB3-205ENST00000545868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.65□□□□□ -0.54
GABRB3-205ENST00000545868 DNAJC2Q99543 621 aaKnown RBP11.65□□□□□ -0.54
GABRB3-205ENST00000545868 MOV10L1Q9BXT6 1211 aaKnown RBP11.65□□□□□ -0.54
GABRB3-205ENST00000545868 CABP5Q9NP86 173 aa11.65□□□□□ -0.54
GABRB3-205ENST00000545868 MCM9Q9NXL9 1143 aa11.65□□□□□ -0.54
GABRB3-205ENST00000545868 LRRC37A2A6NM11 1700 aa11.65□□□□□ -0.54
GABRB3-205ENST00000545868 ZBED9Q6R2W3 1325 aa11.64□□□□□ -0.55
GABRB3-205ENST00000545868 CYP2D7A0A087X1C5 515 aa11.64□□□□□ -0.55
GABRB3-205ENST00000545868 AKR1B1P15121 316 aa11.64□□□□□ -0.55
GABRB3-205ENST00000545868 TTF1Q15361 905 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-205ENST00000545868 NLRP7Q8WX94 980 aa11.64□□□□□ -0.55
GABRB3-205ENST00000545868 CRNKL1Q9BZJ0 848 aaKnown RBP11.64□□□□□ -0.55
GABRB3-205ENST00000545868 UBE2OQ9C0C9 1292 aaKnown RBP11.64□□□□□ -0.55
GABRB3-205ENST00000545868 ARMT1Q9H993 441 aa11.64□□□□□ -0.55
GABRB3-205ENST00000545868 DDX20Q9UHI6 824 aaKnown RBP11.64□□□□□ -0.55
GABRB3-205ENST00000545868 CHD9Q3L8U1 2897 aa11.64□□□□□ -0.55
GABRB3-205ENST00000545868 MPHOSPH10O00566 681 aaKnown RBP11.63□□□□□ -0.55
GABRB3-205ENST00000545868 COBLO75128 1261 aa11.63□□□□□ -0.55
GABRB3-205ENST00000545868 ADORA2AP29274 412 aa11.63□□□□□ -0.55
GABRB3-205ENST00000545868 ADD2P35612 726 aa11.63□□□□□ -0.55
GABRB3-205ENST00000545868 MFSD14CQ5VZR4 134 aa11.63□□□□□ -0.55
GABRB3-205ENST00000545868 DEFB123Q8N688 67 aa11.63□□□□□ -0.55
GABRB3-205ENST00000545868 KIF1BPQ96EK5 621 aa11.63□□□□□ -0.55
GABRB3-205ENST00000545868 SPATC1LQ9H0A9 340 aa11.63□□□□□ -0.55
GABRB3-205ENST00000545868 CWC22Q9HCG8 908 aaKnown RBP11.63□□□□□ -0.55
GABRB3-205ENST00000545868 ZBTB40Q9NUA8 1239 aa11.63□□□□□ -0.55
GABRB3-205ENST00000545868 IVNS1ABPQ9Y6Y0 642 aa11.63□□□□□ -0.55
GABRB3-205ENST00000545868 GLRX3O76003 335 aaKnown RBP11.62□□□□□ -0.55
GABRB3-205ENST00000545868 MBD4O95243 580 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 ERCC3P19447 782 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 ATP2B2Q01814 1243 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 COG2Q14746 738 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 HSP90AB4PQ58FF6 505 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 ANO1Q5XXA6 986 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 TMEM179Q6ZVK1 233 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 SPICE1Q8N0Z3 855 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 CLASRPQ8N2M8 674 aaKnown RBP11.62□□□□□ -0.55
GABRB3-205ENST00000545868 SLC17A8Q8NDX2 589 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 LPAR1Q92633 364 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 ATG4CQ96DT6 458 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 TANGO6Q9C0B7 1094 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 SENP6Q9GZR1 1112 aaPredicted RBP11.62□□□□□ -0.55
GABRB3-205ENST00000545868 BOLA2Q9H3K6 86 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 MTMR10Q9NXD2 777 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
GABRB3-205ENST00000545868 CHD7Q9P2D1 2997 aa11.61□□□□□ -0.55
GABRB3-205ENST00000545868 CNGA1P29973 690 aa11.61□□□□□ -0.55
GABRB3-205ENST00000545868 GJC2Q5T442 439 aaPredicted RBP11.61□□□□□ -0.55
GABRB3-205ENST00000545868 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
GABRB3-205ENST00000545868 DIEXFQ68CQ4 756 aaKnown RBP11.61□□□□□ -0.55
GABRB3-205ENST00000545868 SHCBP1Q8NEM2 672 aa11.61□□□□□ -0.55
GABRB3-205ENST00000545868 BCL11AQ9H165 835 aa11.61□□□□□ -0.55
GABRB3-205ENST00000545868 VCPKMTQ9H867 229 aa11.61□□□□□ -0.55
GABRB3-205ENST00000545868 PAG1Q9NWQ8 432 aa11.61□□□□□ -0.55
GABRB3-205ENST00000545868 TMX2Q9Y320 296 aa11.61□□□□□ -0.55
GABRB3-205ENST00000545868 DNM1LO00429 736 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 IFIT2P09913 472 aaKnown RBP11.6□□□□□ -0.55
GABRB3-205ENST00000545868 ATP5JP18859 108 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 CDK8P49336 464 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 RTP1P59025 263 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 ICA1Q05084 483 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 TMEM132BQ14DG7 1078 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 C12orf60Q5U649 245 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 RPAP2Q8IXW5 612 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-205ENST00000545868 HAUS7Q99871 368 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 FAM217BQ9NTX9 383 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-205ENST00000545868 FBXO28Q9NVF7 368 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 SWAP70Q9UH65 585 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 ADAMTS5Q9UNA0 930 aa11.6□□□□□ -0.55
GABRB3-205ENST00000545868 USP17L12C9JPN9 530 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 USP17L21D6R901 530 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 C3orf80F5H4A9 247 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 DLL1O00548 723 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 MSCO60682 206 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 FLOT1O75955 427 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 SSTR3P32745 418 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-205ENST00000545868 SNX17Q15036 470 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 FAM47AQ5JRC9 791 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 DPP9Q86TI2 863 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 REPS2Q8NFH8 660 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 MAML3Q96JK9 1138 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.59□□□□□ -0.55
GABRB3-205ENST00000545868 PUS7LQ9H0K6 701 aaKnown RBP11.59□□□□□ -0.55
GABRB3-205ENST00000545868 ATP8A2Q9NTI2 1148 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 HOXC10Q9NYD6 342 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 STXBP5LQ9Y2K9 1186 aa11.59□□□□□ -0.55
GABRB3-205ENST00000545868 MYH6P13533 1939 aa11.58□□□□□ -0.55
GABRB3-205ENST00000545868 TRIM6-TRIM34B2RNG4 842 aa11.58□□□□□ -0.56
GABRB3-205ENST00000545868 WDR46O15213 610 aaKnown RBP11.58□□□□□ -0.56
GABRB3-205ENST00000545868 SEPT4O43236 478 aa11.58□□□□□ -0.56
GABRB3-205ENST00000545868 STRNO43815 780 aa11.58□□□□□ -0.56
GABRB3-205ENST00000545868 SMARCA5O60264 1052 aaPredicted RBP11.58□□□□□ -0.56
GABRB3-205ENST00000545868 RAB11FIP3O75154 756 aa11.58□□□□□ -0.56
GABRB3-205ENST00000545868 EEF2P13639 858 aaKnown RBP11.58□□□□□ -0.56
GABRB3-205ENST00000545868 PLS1Q14651 629 aa11.58□□□□□ -0.56
GABRB3-205ENST00000545868 C20orf194Q5TEA3 1177 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms