RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-208ENST00000545831 FAM177A1Q8N128 213 aaPredicted RBP11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 ZNF713Q8N859 430 aaPredicted RBP11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 SMC1BQ8NDV3 1235 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 FBXO18Q8NFZ0 1043 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 CCDC12Q8WUD4 166 aaPredicted RBP11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 FOXD4L4Q8WXT5 416 aaPredicted RBP11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 OTUD5Q96G74 571 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 CLMNQ96JQ2 1002 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 C12orf42Q96LP6 360 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 AIFM3Q96NN9 605 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 PIGSQ96S52 555 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 CPVLQ9H3G5 476 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 ZSCAN16Q9H4T2 348 aaPredicted RBP11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 SH3GLB2Q9NR46 395 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 EMILIN3Q9NT22 766 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 MTMR6Q9Y217 621 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 ATP6V1DQ9Y5K8 247 aa11.59□□□□□ -0.55
NPIPA1-208ENST00000545831 PNMA6FA0A0J9YX94 578 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 KIF3CO14782 793 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 ZBTB5O15062 677 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 F13A1P00488 732 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 HMGCS2P54868 508 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 NLRP5P59047 1200 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 GUCY1B3Q02153 619 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 PPIL2Q13356 520 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 GNL2Q13823 731 aaKnown RBP11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 SLC35G1Q2M3R5 365 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 MCTP1Q6DN14 999 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 HEATR3Q7Z4Q2 680 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 CCDC148Q8NFR7 591 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 TANGO6Q9C0B7 1094 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 JMJD4Q9H9V9 463 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 BRMS1Q9HCU9 246 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 ZDHHC9Q9Y397 364 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 PAPPA2Q9BXP8 1791 aa11.58□□□□□ -0.56
NPIPA1-208ENST00000545831 VCAM1P19320 739 aa11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 CALML3P27482 149 aa11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 CDC37Q16543 378 aaPredicted RBP11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 OTUD7BQ6GQQ9 843 aa11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 PRPF38AQ8NAV1 312 aaKnown RBP11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 KIFC2Q96AC6 838 aa11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 MTMR8Q96EF0 704 aa11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 RPAP3Q9H6T3 665 aaPredicted RBP11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 VPS54Q9P1Q0 977 aa11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 PRR12Q9ULL5 1215 aa11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 CTDP1Q9Y5B0 961 aaPredicted RBP11.57□□□□□ -0.56
NPIPA1-208ENST00000545831 USP17L15C9J2P7 530 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 USP17L13C9JLJ4 530 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 USP17L11C9JVI0 530 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 USP17L18D6R9N7 530 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 USP17L22D6RA61 530 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 USP17L17D6RBQ6 530 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 USP17L19D6RCP7 530 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 USP17L20D6RJB6 530 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 IRF6O14896 467 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 FLOT1O75955 427 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 MMP1P03956 469 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 FDX1P10109 184 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 YY1P25490 414 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 NAPAP54920 295 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 USP17L24Q0WX57 530 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 QRICH1Q2TAL8 776 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 CST9Q5W186 159 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 WWC2Q6AWC2 1192 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 GALNT17Q6IS24 598 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 SAMD1Q6SPF0 538 aaPredicted RBP11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 GADL1Q6ZQY3 521 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 FASTKD5Q7L8L6 764 aaKnown RBP11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 FBXO11Q86XK2 927 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 PROCA1Q8NCQ7 364 aaPredicted RBP11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 GPKOWQ92917 476 aaPredicted RBP eCLIP11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 TNPO1Q92973 898 aaKnown RBP11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 GBP4Q96PP9 640 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 SLF1Q9BQI6 1058 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 PHF20Q9BVI0 1012 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 AMNQ9BXJ7 453 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 BARHL2Q9NY43 387 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 PNMA2Q9UL42 364 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 KCNJ14Q9UNX9 436 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 KCNH4Q9UQ05 1017 aa11.56□□□□□ -0.56
NPIPA1-208ENST00000545831 A0A0G2JLL6 359 aaPredicted RBP11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 STXBP3O00186 592 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 ZBED4O75132 1171 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 TOMM70O94826 608 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 GNA11P29992 359 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 KRT2P35908 639 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 HUNKP57058 714 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 RESTQ13127 1097 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 PABPC4Q13310 644 aaKnown RBP eCLIP11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 SNAPC2Q13487 334 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 COG2Q14746 738 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 PPP1R18Q6NYC8 613 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 BRAPQ7Z569 592 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 PRRT2Q7Z6L0 340 aaPredicted RBP11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 FERMT3Q86UX7 667 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 C6orf50Q9HD87 102 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 GJB4Q9NTQ9 266 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 PPP1R9AQ9ULJ8 1098 aa11.55□□□□□ -0.56
NPIPA1-208ENST00000545831 ESYT2A0FGR8 921 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms