RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 LRRC15Q8TF66 581 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 MYH13Q9UKX3 1938 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 TTC26A0AVF1 554 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 PARP1P09874 1014 aaKnown RBP17.81■□□□□ 0.44
LDLR-204ENST00000545707 PCP11498 1178 aaKnown RBP17.81■□□□□ 0.44
LDLR-204ENST00000545707 CYP26C1Q6V0L0 522 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 PNMA1Q8ND90 353 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 CCDC51Q96ER9 411 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 ATP8A2Q9NTI2 1148 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 GUCA1BQ9UMX6 200 aa17.81■□□□□ 0.44
LDLR-204ENST00000545707 TTF2Q9UNY4 1162 aaKnown RBP17.81■□□□□ 0.44
LDLR-204ENST00000545707 SPATA31A1Q5TZJ5 1347 aa17.8■□□□□ 0.44
LDLR-204ENST00000545707 FECHP22830 423 aa17.8■□□□□ 0.44
LDLR-204ENST00000545707 SLC44A5Q8NCS7 719 aa17.8■□□□□ 0.44
LDLR-204ENST00000545707 DISC1Q9NRI5 854 aa17.8■□□□□ 0.44
LDLR-204ENST00000545707 SRP68Q9UHB9 627 aaKnown RBP17.8■□□□□ 0.44
LDLR-204ENST00000545707 REXO2Q9Y3B8 237 aaKnown RBP17.8■□□□□ 0.44
LDLR-204ENST00000545707 LONP1P36776 959 aaKnown RBP17.8■□□□□ 0.44
LDLR-204ENST00000545707 NCAPH2Q6IBW4 605 aa17.8■□□□□ 0.44
LDLR-204ENST00000545707 CEP112Q8N8E3 955 aa17.8■□□□□ 0.44
LDLR-204ENST00000545707 CCDC66A2RUB6 948 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 CCDC151A5D8V7 595 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 ENC1O14682 589 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 GOLGA8HP0CJ92 632 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 CLEC4GQ6UXB4 293 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 HEATR3Q7Z4Q2 680 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 ADSSL1Q8N142 457 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 ANKRD20A12PQ8NF67 263 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 NAPGQ99747 312 aaPredicted RBP17.79■□□□□ 0.44
LDLR-204ENST00000545707 PCDHA4Q9UN74 947 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 STRCQ7RTU9 1775 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 CCDC194A0A1B0GVG4 234 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 ZBTB22O15209 634 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 KIF5BP33176 963 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 HNRNPH2P55795 449 aaKnown RBP17.79■□□□□ 0.44
LDLR-204ENST00000545707 SPAG1Q07617 926 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 DTHD1Q6ZMT9 781 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 PTF1AQ7RTS3 328 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 NOA1Q8NC60 698 aaKnown RBP17.79■□□□□ 0.44
LDLR-204ENST00000545707 TRERF1Q96PN7 1200 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 ABCB6Q9NP58 842 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 RMND1Q9NWS8 449 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 ARPP21Q9UBL0 812 aaPredicted RBP17.79■□□□□ 0.44
LDLR-204ENST00000545707 HDAC6Q9UBN7 1215 aa17.79■□□□□ 0.44
LDLR-204ENST00000545707 CYTH3O43739 400 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 GRIK5Q16478 980 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 BEND6Q5SZJ8 279 aaPredicted RBP17.78■□□□□ 0.44
LDLR-204ENST00000545707 JAKMIP3Q5VZ66 844 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 ARL6IP4Q66PJ3 421 aaKnown RBP17.78■□□□□ 0.44
LDLR-204ENST00000545707 DZIP1Q86YF9 867 aaKnown RBP17.78■□□□□ 0.44
LDLR-204ENST00000545707 PDE11AQ9HCR9 933 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 RNF216Q9NWF9 866 aaPredicted RBP17.78■□□□□ 0.44
LDLR-204ENST00000545707 PCDHA6Q9UN73 950 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 PCDHA8Q9Y5H6 950 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 EPN1Q9Y6I3 576 aaPredicted RBP17.78■□□□□ 0.44
LDLR-204ENST00000545707 MYH8P13535 1937 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 CALML3P27482 149 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 USP5P45974 858 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 VSNL1P62760 191 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 BRD3Q15059 726 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 DIXDC1Q155Q3 683 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 MB21D1Q8N884 522 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 MAD2L2Q9UI95 211 aa17.78■□□□□ 0.44
LDLR-204ENST00000545707 COL14A1Q05707 1796 aaKnown RBP17.77■□□□□ 0.44
LDLR-204ENST00000545707 KLRC4O43908 158 aa17.77■□□□□ 0.44
LDLR-204ENST00000545707 N4BP1O75113 896 aaKnown RBP17.77■□□□□ 0.44
LDLR-204ENST00000545707 NDUFA10O95299 355 aa17.77■□□□□ 0.44
LDLR-204ENST00000545707 UBA7P41226 1012 aa17.77■□□□□ 0.44
LDLR-204ENST00000545707 KLK7P49862 253 aa17.77■□□□□ 0.44
LDLR-204ENST00000545707 SH3RF3Q8TEJ3 882 aaPredicted RBP17.77■□□□□ 0.44
LDLR-204ENST00000545707 TRIM47Q96LD4 638 aa17.77■□□□□ 0.44
LDLR-204ENST00000545707 MKNK2Q9HBH9 465 aa17.77■□□□□ 0.44
LDLR-204ENST00000545707 STX8Q9UNK0 236 aa17.77■□□□□ 0.44
LDLR-204ENST00000545707 NUTM2BA6NNL0 878 aaPredicted RBP17.77■□□□□ 0.43
LDLR-204ENST00000545707 NUTM2EB1AL46 878 aaPredicted RBP17.77■□□□□ 0.43
LDLR-204ENST00000545707 H7C1D1 291 aa17.77■□□□□ 0.43
LDLR-204ENST00000545707 MAP2K7O14733 419 aa17.77■□□□□ 0.43
LDLR-204ENST00000545707 NKRFO15226 690 aaKnown RBP eCLIP17.77■□□□□ 0.43
LDLR-204ENST00000545707 SBK1Q52WX2 424 aa17.77■□□□□ 0.43
LDLR-204ENST00000545707 NLRP3Q96P20 1036 aa17.77■□□□□ 0.43
LDLR-204ENST00000545707 B4DLN1 442 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 M0R2N6 131 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 C12orf60Q5U649 245 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 WDR59Q6PJI9 974 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 GPR101Q96P66 508 aaPredicted RBP17.76■□□□□ 0.43
LDLR-204ENST00000545707 SAP30BPQ9UHR5 308 aaKnown RBP17.76■□□□□ 0.43
LDLR-204ENST00000545707 MYO6Q9UM54 1294 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 CTAGE15A4D2H0 777 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 SRGAP2O75044 1071 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 CTAGE8P0CG41 777 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 CTAGE6Q86UF2 777 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 NBPF5PQ86XG9 351 aaPredicted RBP17.76■□□□□ 0.43
LDLR-204ENST00000545707 CTAGE4Q8IX94 777 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 OR8K1Q8NGG5 319 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 PYM1Q9BRP8 204 aaKnown RBP17.76■□□□□ 0.43
LDLR-204ENST00000545707 AGPAT5Q9NUQ2 364 aa17.76■□□□□ 0.43
LDLR-204ENST00000545707 LUC7L2Q9Y383 392 aaKnown RBP17.76■□□□□ 0.43
LDLR-204ENST00000545707 A0A1B0GUL6 1792 aa17.75■□□□□ 0.43
LDLR-204ENST00000545707 FAM193AP78312 1265 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms