RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 DUSP11O75319 330 aaKnown RBP18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 PTPRCP08575 1304 aa18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 CST5P28325 142 aaPredicted RBP18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 SSTR3P32745 418 aaPredicted RBP18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 TAP1Q03518 808 aa18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 KCTD2Q14681 263 aa18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 GNASQ5JWF2 1037 aa18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 FOCADQ5VW36 1801 aa18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 SPICE1Q8N0Z3 855 aa18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 SCLYQ96I15 445 aa18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 NOC4LQ9BVI4 516 aaKnown RBP18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 TRPV6Q9H1D0 765 aa18.87■□□□□ 0.61
CLSTN3-216ENST00000545663 EVX2Q03828 476 aa18.86■□□□□ 0.61
CLSTN3-216ENST00000545663 PCSK9Q8NBP7 692 aaKnown RBP18.86■□□□□ 0.61
CLSTN3-216ENST00000545663 ZNF316A6NFI3 1004 aaPredicted RBP18.85■□□□□ 0.61
CLSTN3-216ENST00000545663 CTAGE5O15320 804 aa18.85■□□□□ 0.61
CLSTN3-216ENST00000545663 SLC25A27O95847 323 aa18.85■□□□□ 0.61
CLSTN3-216ENST00000545663 ALADP13716 330 aa18.85■□□□□ 0.61
CLSTN3-216ENST00000545663 PLCD1P51178 756 aa18.85■□□□□ 0.61
CLSTN3-216ENST00000545663 BEX3Q00994 111 aa18.85■□□□□ 0.61
CLSTN3-216ENST00000545663 EHD4Q9H223 541 aa18.85■□□□□ 0.61
CLSTN3-216ENST00000545663 ZFHX2Q9C0A1 2572 aaPredicted RBP18.85■□□□□ 0.61
CLSTN3-216ENST00000545663 SPTBN4Q9H254 2564 aa18.84■□□□□ 0.61
CLSTN3-216ENST00000545663 MPHOSPH10O00566 681 aaKnown RBP18.84■□□□□ 0.61
CLSTN3-216ENST00000545663 IL9P15248 144 aa18.84■□□□□ 0.61
CLSTN3-216ENST00000545663 GJA9P57773 515 aa18.84■□□□□ 0.61
CLSTN3-216ENST00000545663 CLEC10AQ8IUN9 316 aa18.84■□□□□ 0.61
CLSTN3-216ENST00000545663 MIGA1Q8NAN2 632 aa18.84■□□□□ 0.61
CLSTN3-216ENST00000545663 UPF3AQ9H1J1 476 aaKnown RBP18.84■□□□□ 0.61
CLSTN3-216ENST00000545663 KCNH6Q9H252 994 aa18.84■□□□□ 0.61
CLSTN3-216ENST00000545663 ZDBF2Q9HCK1 2354 aa18.83■□□□□ 0.61
CLSTN3-216ENST00000545663 GRIN2DO15399 1336 aa18.83■□□□□ 0.61
CLSTN3-216ENST00000545663 CYP2E1P05181 493 aaPredicted RBP18.83■□□□□ 0.6
CLSTN3-216ENST00000545663 USP5P45974 858 aa18.83■□□□□ 0.6
CLSTN3-216ENST00000545663 CXCL17Q6UXB2 119 aa18.83■□□□□ 0.6
CLSTN3-216ENST00000545663 RIOX2Q8IUF8 465 aa18.83■□□□□ 0.6
CLSTN3-216ENST00000545663 SIAH1Q8IUQ4 282 aa18.83■□□□□ 0.6
CLSTN3-216ENST00000545663 RPUSD2Q8IZ73 545 aaKnown RBP18.83■□□□□ 0.6
CLSTN3-216ENST00000545663 SLC43A3Q8NBI5 491 aa18.83■□□□□ 0.6
CLSTN3-216ENST00000545663 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.83■□□□□ 0.6
CLSTN3-216ENST00000545663 SSH1Q8WYL5 1049 aa18.83■□□□□ 0.6
CLSTN3-216ENST00000545663 FBXO28Q9NVF7 368 aa18.83■□□□□ 0.6
CLSTN3-216ENST00000545663 ACVR2BQ13705 512 aa18.82■□□□□ 0.6
CLSTN3-216ENST00000545663 CCDC144BQ3MJ40 725 aa18.82■□□□□ 0.6
CLSTN3-216ENST00000545663 HFE2Q6ZVN8 426 aa18.82■□□□□ 0.6
CLSTN3-216ENST00000545663 AGBL1Q96MI9 1066 aa18.82■□□□□ 0.6
CLSTN3-216ENST00000545663 UBE2ZQ9H832 354 aaPredicted RBP18.82■□□□□ 0.6
CLSTN3-216ENST00000545663 PIH1D3Q9NQM4 214 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-216ENST00000545663 ZNF318Q5VUA4 2279 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 MYH1P12882 1939 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 POTEB3A0JP26 581 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 ST18O60284 1047 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 B4GALT4O60513 344 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 UQCRFS1P1P0C7P4 283 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 KCNA5P22460 613 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 CYP7A1P22680 504 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 STAT3P40763 770 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 POTEBQ6S5H4 581 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 DEFB128Q7Z7B8 93 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 SPC25Q9HBM1 224 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 ADAMTS5Q9UNA0 930 aa18.81■□□□□ 0.6
CLSTN3-216ENST00000545663 DCXO43602 365 aa18.8■□□□□ 0.6
CLSTN3-216ENST00000545663 PTGS1P23219 599 aa18.8■□□□□ 0.6
CLSTN3-216ENST00000545663 ITGA7Q13683 1181 aa18.8■□□□□ 0.6
CLSTN3-216ENST00000545663 MAMDC4Q6UXC1 1216 aa18.8■□□□□ 0.6
CLSTN3-216ENST00000545663 TTC6Q86TZ1 520 aa18.8■□□□□ 0.6
CLSTN3-216ENST00000545663 GDPD5Q8WTR4 605 aa18.8■□□□□ 0.6
CLSTN3-216ENST00000545663 LEXMQ3ZCV2 418 aa18.79■□□□□ 0.6
CLSTN3-216ENST00000545663 PTCRAQ6ISU1 281 aaPredicted RBP18.79■□□□□ 0.6
CLSTN3-216ENST00000545663 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.79■□□□□ 0.6
CLSTN3-216ENST00000545663 ZNF214Q9UL59 606 aaPredicted RBP18.79■□□□□ 0.6
CLSTN3-216ENST00000545663 VWA5AO00534 786 aa18.78■□□□□ 0.6
CLSTN3-216ENST00000545663 SRGAP3O43295 1099 aa18.78■□□□□ 0.6
CLSTN3-216ENST00000545663 ZAP70P43403 619 aa18.78■□□□□ 0.6
CLSTN3-216ENST00000545663 PSMC6P62333 389 aa18.78■□□□□ 0.6
CLSTN3-216ENST00000545663 HERC6Q8IVU3 1022 aa18.78■□□□□ 0.6
CLSTN3-216ENST00000545663 MSL3Q8N5Y2 521 aaKnown RBP18.78■□□□□ 0.6
CLSTN3-216ENST00000545663 PRSS33Q8NF86 280 aa18.78■□□□□ 0.6
CLSTN3-216ENST00000545663 MYO5AQ9Y4I1 1855 aaKnown RBP18.77■□□□□ 0.6
CLSTN3-216ENST00000545663 ASTN1O14525 1302 aa18.77■□□□□ 0.6
CLSTN3-216ENST00000545663 COL11A1P12107 1806 aaPredicted RBP18.77■□□□□ 0.6
CLSTN3-216ENST00000545663 DNAJC25-GNG10A0A024R161 153 aa18.77■□□□□ 0.6
CLSTN3-216ENST00000545663 LCHNA4D1U4 455 aa18.77■□□□□ 0.6
CLSTN3-216ENST00000545663 GABPAQ06546 454 aa18.77■□□□□ 0.6
CLSTN3-216ENST00000545663 REPS2Q8NFH8 660 aa18.77■□□□□ 0.6
CLSTN3-216ENST00000545663 DDX11Q96FC9 970 aa18.77■□□□□ 0.6
CLSTN3-216ENST00000545663 MEIS3Q99687 375 aa18.77■□□□□ 0.6
CLSTN3-216ENST00000545663 RIPK3Q9Y572 518 aa18.77■□□□□ 0.6
CLSTN3-216ENST00000545663 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.76■□□□□ 0.59
CLSTN3-216ENST00000545663 GRXCR2A6NFK2 248 aa18.76■□□□□ 0.59
CLSTN3-216ENST00000545663 CYP2C9P11712 490 aa18.76■□□□□ 0.59
CLSTN3-216ENST00000545663 TTC39AQ5SRH9 613 aa18.76■□□□□ 0.59
CLSTN3-216ENST00000545663 IER5LQ5T953 404 aa18.76■□□□□ 0.59
CLSTN3-216ENST00000545663 TMCO2Q7Z6W1 182 aaPredicted RBP18.76■□□□□ 0.59
CLSTN3-216ENST00000545663 FGD4Q96M96 766 aa18.76■□□□□ 0.59
CLSTN3-216ENST00000545663 VCPKMTQ9H867 229 aa18.76■□□□□ 0.59
CLSTN3-216ENST00000545663 TMX2Q9Y320 296 aa18.76■□□□□ 0.59
CLSTN3-216ENST00000545663 COL4A4P53420 1690 aaPredicted RBP18.76■□□□□ 0.59
CLSTN3-216ENST00000545663 POLR3DP05423 398 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms