RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ZMYM1Q5SVZ6 1142 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 CTR9Q6PD62 1173 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 THSD4Q6ZMP0 1018 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 TMEM179Q6ZVK1 233 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 OTOP1Q7RTM1 612 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 PLEKHM2Q8IWE5 1019 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 RILPL2Q969X0 211 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 DYNLL2Q96FJ2 89 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 FEZ1Q99689 392 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 OSBPL3Q9H4L5 887 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 ZNF287Q9HBT7 754 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 CPA4Q9UI42 421 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 LOC285556D6RIA3 1793 aa8.8□□□□□ -1
CPSF7-224ENST00000544990 CYP2D7A0A087X1C5 515 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 HOXA7P31268 230 aaPredicted RBP8.79□□□□□ -1
CPSF7-224ENST00000544990 GCLCP48506 637 aaPredicted RBP8.79□□□□□ -1
CPSF7-224ENST00000544990 PRMT2P55345 433 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 IRX3P78415 501 aaPredicted RBP8.79□□□□□ -1
CPSF7-224ENST00000544990 SHROOM1Q2M3G4 852 aaPredicted RBP8.79□□□□□ -1
CPSF7-224ENST00000544990 TREML2Q5T2D2 321 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 BLOC1S3Q6QNY0 202 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 C16orf86Q6ZW13 317 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 IFNL3Q8IZI9 196 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 SLC44A5Q8NCS7 719 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 SEC62Q99442 399 aaKnown RBP8.79□□□□□ -1
CPSF7-224ENST00000544990 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 NAPBQ9H115 298 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 MKNK2Q9HBH9 465 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 HELLSQ9NRZ9 838 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 PTPN22Q9Y2R2 807 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 ADGRA2Q96PE1 1338 aa8.79□□□□□ -1
CPSF7-224ENST00000544990 SLC3A2P08195 630 aaKnown RBP8.78□□□□□ -1
CPSF7-224ENST00000544990 BCRP11274 1271 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 PSMC4P43686 418 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 FCGRTP55899 365 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 SEPT2Q15019 361 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 MCMDC2Q4G0Z9 681 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 RNF19BQ6ZMZ0 732 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 CCDC82Q8N4S0 544 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 GTF3C2Q8WUA4 911 aaPredicted RBP8.78□□□□□ -1
CPSF7-224ENST00000544990 C12orf42Q96LP6 360 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 KIAA1683Q9H0B3 1180 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 ASCC2Q9H1I8 757 aaPredicted RBP8.78□□□□□ -1
CPSF7-224ENST00000544990 SH2D4AQ9H788 454 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 ARHGEF10LQ9HCE6 1279 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 HMX1Q9NP08 348 aaPredicted RBP8.78□□□□□ -1
CPSF7-224ENST00000544990 MGAMO43451 1857 aa8.78□□□□□ -1
CPSF7-224ENST00000544990 USP17L15C9J2P7 530 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 USP17L13C9JLJ4 530 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 USP17L11C9JVI0 530 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 USP17L18D6R9N7 530 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 USP17L22D6RA61 530 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 USP17L17D6RBQ6 530 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 USP17L19D6RCP7 530 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 USP17L20D6RJB6 530 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 HIP1O00291 1037 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 AKR1B1P15121 316 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 GUCY1A2P33402 732 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 RGS19P49795 217 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 MFAP1P55081 439 aaKnown RBP8.77□□□□□ -1.01
CPSF7-224ENST00000544990 COPS2P61201 443 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 ICA1Q05084 483 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 PDE4BQ07343 736 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 USP17L24Q0WX57 530 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 ZYXQ15942 572 aaKnown RBP8.77□□□□□ -1.01
CPSF7-224ENST00000544990 FAM110CQ1W6H9 321 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 LYPD8Q6UX82 237 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 NBPF11Q86T75 865 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 ZNF444Q8N0Y2 327 aaPredicted RBP8.77□□□□□ -1.01
CPSF7-224ENST00000544990 ANKRD13CQ8N6S4 541 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 KANSL2Q9H9L4 492 aa8.77□□□□□ -1.01
CPSF7-224ENST00000544990 ROBO3Q96MS0 1386 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 SDSP20132 328 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 HERVK_113P62684 666 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 PPARAQ07869 468 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 NMIQ13287 307 aaPredicted RBP8.76□□□□□ -1.01
CPSF7-224ENST00000544990 CCDC129Q6ZRS4 1044 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 STK11IPQ8N1F8 1099 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 ACER1Q8TDN7 264 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 COA7Q96BR5 231 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 CALR3Q96L12 384 aaKnown RBP8.76□□□□□ -1.01
CPSF7-224ENST00000544990 TRIM47Q96LD4 638 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 P2RX7Q99572 595 aaKnown RBP8.76□□□□□ -1.01
CPSF7-224ENST00000544990 SPSB2Q99619 263 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 ARHGAP39Q9C0H5 1083 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 EPB41L4AQ9HCS5 686 aaPredicted RBP8.76□□□□□ -1.01
CPSF7-224ENST00000544990 DIAPH3Q9NSV4 1193 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 SRRDQ9UH36 339 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 TMX2Q9Y320 296 aa8.76□□□□□ -1.01
CPSF7-224ENST00000544990 A0A0D9SFI3 127 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 A0A1W2PRG0 241 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 SMIM22K7EJ46 135 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 TNPO2O14787 897 aaKnown RBP8.75□□□□□ -1.01
CPSF7-224ENST00000544990 JUNDP17535 347 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 VCAM1P19320 739 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 RASA1P20936 1047 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 PTPN5P54829 565 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 CAP1Q01518 475 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms