RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 SLC45A1Q9Y2W3 748 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
CIT-216ENST00000544872 PTPRZ1P23471 2315 aaPredicted RBP11.18□□□□□ -0.62
CIT-216ENST00000544872 MYH13Q9UKX3 1938 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 USP17L15C9J2P7 530 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 USP17L13C9JLJ4 530 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 USP17L11C9JVI0 530 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 USP17L18D6R9N7 530 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 USP17L22D6RA61 530 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 USP17L17D6RBQ6 530 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 USP17L19D6RCP7 530 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 USP17L20D6RJB6 530 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 CYP2C8P10632 490 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 COL6A1P12109 1028 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 AKR1B1P15121 316 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 RASA1P20936 1047 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 ITGB8P26012 769 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 HMGCS2P54868 508 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 USP17L24Q0WX57 530 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 ERMP1Q7Z2K6 904 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 NEDD1Q8NHV4 660 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 NCOA7Q8NI08 942 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 TTC14Q96N46 770 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 SENP6Q9GZR1 1112 aaPredicted RBP11.18□□□□□ -0.62
CIT-216ENST00000544872 UPF2Q9HAU5 1272 aaKnown RBP11.18□□□□□ -0.62
CIT-216ENST00000544872 CWC22Q9HCG8 908 aaKnown RBP11.18□□□□□ -0.62
CIT-216ENST00000544872 HOXC10Q9NYD6 342 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 NYAP2Q9P242 653 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 CLIP2Q9UDT6 1046 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 AGTPBP1Q9UPW5 1226 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 SPTBN4Q9H254 2564 aa11.18□□□□□ -0.62
CIT-216ENST00000544872 ROBO3Q96MS0 1386 aa11.17□□□□□ -0.62
CIT-216ENST00000544872 MYH2Q9UKX2 1941 aa11.17□□□□□ -0.62
CIT-216ENST00000544872 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
CIT-216ENST00000544872 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
CIT-216ENST00000544872 EPB41L2O43491 1005 aaKnown RBP11.17□□□□□ -0.62
CIT-216ENST00000544872 HMGB1P09429 215 aaKnown RBP11.17□□□□□ -0.62
CIT-216ENST00000544872 BCRP11274 1271 aa11.17□□□□□ -0.62
CIT-216ENST00000544872 EEF2P13639 858 aaKnown RBP11.17□□□□□ -0.62
CIT-216ENST00000544872 GCLCP48506 637 aaPredicted RBP11.17□□□□□ -0.62
CIT-216ENST00000544872 FGD1P98174 961 aa11.17□□□□□ -0.62
CIT-216ENST00000544872 ZYXQ15942 572 aaKnown RBP11.17□□□□□ -0.62
CIT-216ENST00000544872 SH3D19Q5HYK7 790 aa11.17□□□□□ -0.62
CIT-216ENST00000544872 FAM47AQ5JRC9 791 aa11.17□□□□□ -0.62
CIT-216ENST00000544872 RBM8AQ9Y5S9 174 aaKnown RBP11.17□□□□□ -0.62
CIT-216ENST00000544872 MAST2Q6P0Q8 1798 aa11.17□□□□□ -0.62
CIT-216ENST00000544872 SLURP2P0DP57 97 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 PSMA5P28066 241 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 TRIM32Q13049 653 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 IKQ13123 557 aaPredicted RBP11.16□□□□□ -0.62
CIT-216ENST00000544872 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 TANGO6Q9C0B7 1094 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 KAT14Q9H8E8 782 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 TCP11L1Q9NUJ3 509 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 MTMR4Q9NYA4 1195 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 ATP11BQ9Y2G3 1177 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 TMX2Q9Y320 296 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 MGAMO43451 1857 aa11.16□□□□□ -0.62
CIT-216ENST00000544872 GFRA3O60609 400 aa11.15□□□□□ -0.62
CIT-216ENST00000544872 FGRP09769 529 aa11.15□□□□□ -0.62
CIT-216ENST00000544872 TOP1P11387 765 aaKnown RBP11.15□□□□□ -0.62
CIT-216ENST00000544872 CCNA1P78396 465 aa11.15□□□□□ -0.62
CIT-216ENST00000544872 PTH1RQ03431 593 aa11.15□□□□□ -0.62
CIT-216ENST00000544872 ADGRE1Q14246 886 aa11.15□□□□□ -0.62
CIT-216ENST00000544872 RRP1BQ14684 758 aaKnown RBP11.15□□□□□ -0.62
CIT-216ENST00000544872 SYNE3Q6ZMZ3 975 aa11.15□□□□□ -0.62
CIT-216ENST00000544872 DGKHQ86XP1 1220 aa11.15□□□□□ -0.62
CIT-216ENST00000544872 CHURC1Q8WUH1 139 aa11.15□□□□□ -0.62
CIT-216ENST00000544872 VCPKMTQ9H867 229 aa11.15□□□□□ -0.62
CIT-216ENST00000544872 F5H6K3 240 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 WDR46O15213 610 aaKnown RBP11.14□□□□□ -0.63
CIT-216ENST00000544872 KDM4AO75164 1064 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 HOXA7P31268 230 aaPredicted RBP11.14□□□□□ -0.63
CIT-216ENST00000544872 MCM5P33992 734 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 SLC1A4P43007 532 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 RTP1P59025 263 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 KLRC3Q07444 240 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 KCTD2Q14681 263 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 COG2Q14746 738 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 CCDC84Q86UT8 332 aaPredicted RBP11.14□□□□□ -0.63
CIT-216ENST00000544872 ACER1Q8TDN7 264 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 MKL1Q969V6 931 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 CEP95Q96GE4 821 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 C12orf42Q96LP6 360 aa11.14□□□□□ -0.63
CIT-216ENST00000544872 ZSCAN10Q96SZ4 725 aaPredicted RBP11.14□□□□□ -0.63
CIT-216ENST00000544872 LSG1Q9H089 658 aaKnown RBP11.14□□□□□ -0.63
CIT-216ENST00000544872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
CIT-216ENST00000544872 B4E1Z4 1266 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 E7EWF7 191 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 IFIT3O14879 490 aaKnown RBP11.13□□□□□ -0.63
CIT-216ENST00000544872 FOXP2O15409 715 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 ZBED4O75132 1171 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 FLOT1O75955 427 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 CYP21A2P08686 494 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 FDX1P10109 184 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 IFIT1BQ5T764 474 aaKnown RBP11.13□□□□□ -0.63
CIT-216ENST00000544872 CREB3L3Q68CJ9 461 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 SLFN13Q68D06 897 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 RCSD1Q6JBY9 416 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms