RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 RGS3P49796 1198 aa8.72□□□□□ -1.01
CIT-215ENST00000544800 ARHGAP8P85298 464 aa8.72□□□□□ -1.01
CIT-215ENST00000544800 UBE4AQ14139 1066 aa8.72□□□□□ -1.01
CIT-215ENST00000544800 CLUL1Q15846 466 aa8.72□□□□□ -1.01
CIT-215ENST00000544800 SCLYQ96I15 445 aa8.72□□□□□ -1.01
CIT-215ENST00000544800 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
CIT-215ENST00000544800 ZBED2Q9BTP6 218 aa8.72□□□□□ -1.01
CIT-215ENST00000544800 IDI2Q9BXS1 227 aa8.72□□□□□ -1.01
CIT-215ENST00000544800 ROBO3Q96MS0 1386 aa8.72□□□□□ -1.01
CIT-215ENST00000544800 COL4A4P53420 1690 aaPredicted RBP8.72□□□□□ -1.01
CIT-215ENST00000544800 SMCHD1A6NHR9 2005 aa8.71□□□□□ -1.01
CIT-215ENST00000544800 DOCK1Q14185 1865 aa8.71□□□□□ -1.01
CIT-215ENST00000544800 ANKRD18BA2A2Z9 1011 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 DDTLA6NHG4 134 aaPredicted RBP8.71□□□□□ -1.02
CIT-215ENST00000544800 ASGR1P07306 291 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 CST5P28325 142 aaPredicted RBP8.71□□□□□ -1.02
CIT-215ENST00000544800 CAP2P40123 477 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 EMP3P54852 163 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 CTC1Q2NKJ3 1217 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 DEFB128Q7Z7B8 93 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 RPAINQ86UA6 219 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 DCLK2Q8N568 766 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 GPR161Q8N6U8 529 aaKnown RBP8.71□□□□□ -1.02
CIT-215ENST00000544800 EFCAB3Q8N7B9 438 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 FBXO22Q8NEZ5 403 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 MAML3Q96JK9 1138 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 CFAP53Q96M91 514 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 METTL22Q9BUU2 404 aaPredicted RBP8.71□□□□□ -1.02
CIT-215ENST00000544800 CDV3Q9UKY7 258 aaKnown RBP8.71□□□□□ -1.02
CIT-215ENST00000544800 IQSEC3Q9UPP2 1182 aaPredicted RBP8.71□□□□□ -1.02
CIT-215ENST00000544800 BOLA1Q9Y3E2 137 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 SYNRGQ9UMZ2 1314 aa8.71□□□□□ -1.02
CIT-215ENST00000544800 CLCN5P51795 746 aa8.7□□□□□ -1.02
CIT-215ENST00000544800 ANGPT1Q15389 498 aa8.7□□□□□ -1.02
CIT-215ENST00000544800 PTPN21Q16825 1174 aa8.7□□□□□ -1.02
CIT-215ENST00000544800 PRR23BQ6ZRT6 265 aa8.7□□□□□ -1.02
CIT-215ENST00000544800 FBXO33Q7Z6M2 555 aa8.7□□□□□ -1.02
CIT-215ENST00000544800 VPS37DQ86XT2 251 aa8.7□□□□□ -1.02
CIT-215ENST00000544800 CRACR2BQ8N4Y2 399 aaPredicted RBP8.7□□□□□ -1.02
CIT-215ENST00000544800 SLC43A3Q8NBI5 491 aa8.7□□□□□ -1.02
CIT-215ENST00000544800 RAD9AQ99638 391 aa8.7□□□□□ -1.02
CIT-215ENST00000544800 PLA2G12BQ9BX93 195 aa8.7□□□□□ -1.02
CIT-215ENST00000544800 SEZ6LQ9BYH1 1024 aa8.7□□□□□ -1.02
CIT-215ENST00000544800 NSUN3Q9H649 340 aaKnown RBP8.7□□□□□ -1.02
CIT-215ENST00000544800 LINC01553A4QN01 128 aa8.69□□□□□ -1.02
CIT-215ENST00000544800 USP17L10C9JJH3 530 aa8.69□□□□□ -1.02
CIT-215ENST00000544800 TAF4O00268 1085 aa8.69□□□□□ -1.02
CIT-215ENST00000544800 HOXB7P09629 217 aa8.69□□□□□ -1.02
CIT-215ENST00000544800 ZNF865P0CJ78 1059 aaPredicted RBP8.69□□□□□ -1.02
CIT-215ENST00000544800 LBX2Q6XYB7 198 aa8.69□□□□□ -1.02
CIT-215ENST00000544800 ABRAQ8N0Z2 381 aa8.69□□□□□ -1.02
CIT-215ENST00000544800 LENG1Q96BZ8 264 aaPredicted RBP8.69□□□□□ -1.02
CIT-215ENST00000544800 BTBD7Q9P203 1132 aa8.69□□□□□ -1.02
CIT-215ENST00000544800 CD207Q9UJ71 328 aa8.69□□□□□ -1.02
CIT-215ENST00000544800 ZMIZ1Q9ULJ6 1067 aa8.69□□□□□ -1.02
CIT-215ENST00000544800 MYO18BQ8IUG5 2567 aa8.69□□□□□ -1.02
CIT-215ENST00000544800 USP17L15C9J2P7 530 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 USP17L13C9JLJ4 530 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 USP17L11C9JVI0 530 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 USP17L18D6R9N7 530 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 USP17L22D6RA61 530 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 USP17L17D6RBQ6 530 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 USP17L19D6RCP7 530 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 USP17L20D6RJB6 530 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 H7C1W4 665 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 BAIAP3O94812 1187 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 EYA4O95677 639 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 TAL1P17542 331 aaPredicted RBP8.68□□□□□ -1.02
CIT-215ENST00000544800 RFC2P35250 354 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 KCNJ6P48051 423 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 DLX2Q07687 328 aaPredicted RBP8.68□□□□□ -1.02
CIT-215ENST00000544800 USP17L24Q0WX57 530 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 PPM1JQ5JR12 505 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 ZGPATQ8N5A5 531 aaKnown RBP8.68□□□□□ -1.02
CIT-215ENST00000544800 SHCBP1Q8NEM2 672 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 SPC25Q9HBM1 224 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 ANKFY1Q9P2R3 1169 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 FAM184BQ9ULE4 1060 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 LHX6Q9UPM6 363 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 A0A1B0GUL6 1792 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 ZNF462Q96JM2 2506 aa8.68□□□□□ -1.02
CIT-215ENST00000544800 MYADML2A6NDP7 307 aa8.67□□□□□ -1.02
CIT-215ENST00000544800 DUSP11O75319 330 aaKnown RBP8.67□□□□□ -1.02
CIT-215ENST00000544800 C6orf222P0C671 652 aaPredicted RBP8.67□□□□□ -1.02
CIT-215ENST00000544800 DSPP15924 2871 aaKnown RBP8.67□□□□□ -1.02
CIT-215ENST00000544800 SHC2P98077 582 aa8.67□□□□□ -1.02
CIT-215ENST00000544800 LMNB2Q03252 620 aa8.67□□□□□ -1.02
CIT-215ENST00000544800 IFIT5Q13325 482 aaKnown RBP8.67□□□□□ -1.02
CIT-215ENST00000544800 DIXDC1Q155Q3 683 aa8.67□□□□□ -1.02
CIT-215ENST00000544800 KRT24Q2M2I5 525 aa8.67□□□□□ -1.02
CIT-215ENST00000544800 GNASQ5JWF2 1037 aa8.67□□□□□ -1.02
CIT-215ENST00000544800 CC2D1BQ5T0F9 858 aaKnown RBP8.67□□□□□ -1.02
CIT-215ENST00000544800 UBE3BQ7Z3V4 1068 aa8.67□□□□□ -1.02
CIT-215ENST00000544800 NBEAQ8NFP9 2946 aa8.67□□□□□ -1.02
CIT-215ENST00000544800 RNF25Q96BH1 459 aaPredicted RBP8.67□□□□□ -1.02
CIT-215ENST00000544800 TINF2Q9BSI4 451 aa8.67□□□□□ -1.02
CIT-215ENST00000544800 FTOQ9C0B1 505 aaKnown RBP eCLIP8.67□□□□□ -1.02
CIT-215ENST00000544800 TRPV6Q9H1D0 765 aa8.67□□□□□ -1.02
CIT-215ENST00000544800 PHAXQ9H814 394 aaKnown RBP8.67□□□□□ -1.02
CIT-215ENST00000544800 EMILIN3Q9NT22 766 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms