RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 FERMT2Q96AC1 680 aa16.58■□□□□ 0.24
SEMA4D-224ENST00000544513 MTMR4Q9NYA4 1195 aa16.58■□□□□ 0.24
SEMA4D-224ENST00000544513 CLIP2Q9UDT6 1046 aa16.58■□□□□ 0.24
SEMA4D-224ENST00000544513 PRUNE2Q8WUY3 3088 aa16.58■□□□□ 0.24
SEMA4D-224ENST00000544513 TTC41PQ6P2S7 1318 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 SYNGAP1Q96PV0 1343 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 TRIM43BA6NCK2 446 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 TLE2Q04725 743 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 SNRNP48Q6IEG0 339 aaKnown RBP16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 MAMDC4Q6UXC1 1216 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 SH3RF1Q7Z6J0 888 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 RNF180Q86T96 592 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 STK11IPQ8N1F8 1099 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 GMCL1P1Q8NEA9 526 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 TRIM43Q96BQ3 446 aaPredicted RBP16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 CEP95Q96GE4 821 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 SLC38A10Q9HBR0 1119 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 ZNF287Q9HBT7 754 aa16.57■□□□□ 0.24
SEMA4D-224ENST00000544513 PLIN4Q96Q06 1357 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 ADAMTS4O75173 837 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 PRDM1O75626 825 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 SNAI1O95863 264 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 PGK1P00558 417 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 AKR1A1P14550 325 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 TDO2P48775 406 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 SHHQ15465 462 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 ZNF467Q7Z7K2 595 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 IFNL3Q8IZI9 196 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 ZNF444Q8N0Y2 327 aaPredicted RBP16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 PI4K2BQ8TCG2 481 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 BADQ92934 168 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 GUCD1Q96NT3 240 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 CNPY2Q9Y2B0 182 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 PCDHB15Q9Y5E8 787 aa16.56■□□□□ 0.24
SEMA4D-224ENST00000544513 MYH4Q9Y623 1939 aa16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 DLL1O00548 723 aa16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 TTLL1O95922 423 aa16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 ITGB8P26012 769 aa16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 LRRFIP1Q32MZ4 808 aaKnown RBP16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 C9orf50Q5SZB4 431 aa16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 CCSAPQ6IQ19 270 aaPredicted RBP16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 NEDD1Q8NHV4 660 aa16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 OTUD7AQ8TE49 926 aaPredicted RBP16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 LENG1Q96BZ8 264 aaPredicted RBP16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 SEC62Q99442 399 aaKnown RBP16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 TSEN34Q9BSV6 310 aaKnown RBP16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 PRDM5Q9NQX1 630 aaPredicted RBP16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 FEM1BQ9UK73 627 aa16.55■□□□□ 0.24
SEMA4D-224ENST00000544513 A0A1W2PQ45 241 aaPredicted RBP16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 A0A1W2PQY0 241 aa16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 KIAA0355O15063 1070 aa16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 ZBED4O75132 1171 aa16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 APPP05067 770 aa16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 OAZ1P54368 228 aa16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 ZMYM1Q5SVZ6 1142 aa16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 KLHDC9Q8NEP7 349 aa16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 FGD4Q96M96 766 aa16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 NACAP1Q9BZK3 213 aa16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 SPTBN5Q9NRC6 3674 aaKnown RBP16.54■□□□□ 0.24
SEMA4D-224ENST00000544513 SYNRGQ9UMZ2 1314 aa16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 ERC2O15083 957 aa16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 FOXP2O15409 715 aa16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 ANKRD33Q7Z3H0 272 aa16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 CPXCR1Q8N123 301 aa16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 KIFC2Q96AC6 838 aa16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 DDX11Q96FC9 970 aa16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 TOX2Q96NM4 488 aa16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 RAVER2Q9HCJ3 691 aaKnown RBP16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 FBXO40Q9UH90 709 aa16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 FAM184BQ9ULE4 1060 aa16.53■□□□□ 0.24
SEMA4D-224ENST00000544513 DUSP11O75319 330 aaKnown RBP16.52■□□□□ 0.24
SEMA4D-224ENST00000544513 CLTBP09497 229 aa16.52■□□□□ 0.24
SEMA4D-224ENST00000544513 ACLYP53396 1101 aa16.52■□□□□ 0.24
SEMA4D-224ENST00000544513 PDE4BQ07343 736 aa16.52■□□□□ 0.24
SEMA4D-224ENST00000544513 SLFN13Q68D06 897 aa16.52■□□□□ 0.24
SEMA4D-224ENST00000544513 LRRC47Q8N1G4 583 aaKnown RBP16.52■□□□□ 0.24
SEMA4D-224ENST00000544513 CHST13Q8NET6 341 aa16.52■□□□□ 0.24
SEMA4D-224ENST00000544513 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 MOXD2PA6NHM9 499 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 ADCY6O43306 1168 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 TSPY3P0CV98 308 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 TSPY8P0CW00 308 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 FDX1P10109 184 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 BMP3P12645 472 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 CST5P28325 142 aaPredicted RBP16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 SMAD3P84022 425 aaKnown RBP16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 TFAP4Q01664 338 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 PPARAQ07869 468 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 ACVR2BQ13705 512 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 KATNBL1Q9H079 304 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 UPF3AQ9H1J1 476 aaKnown RBP16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 CHD9Q3L8U1 2897 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 TTC28Q96AY4 2481 aa16.51■□□□□ 0.23
SEMA4D-224ENST00000544513 PLA2G6O60733 806 aa16.5■□□□□ 0.23
SEMA4D-224ENST00000544513 PQBP1O60828 265 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms